RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 MICAL1Q8TDZ2 1067 aa7.82□□□□□ -1.16
HMGB3P5-201ENST00000428894 BTN2A2Q8WVV5 523 aa7.82□□□□□ -1.16
HMGB3P5-201ENST00000428894 PEG3Q9GZU2 1588 aa7.82□□□□□ -1.16
HMGB3P5-201ENST00000428894 NKX2-4Q9H2Z4 354 aa7.82□□□□□ -1.16
HMGB3P5-201ENST00000428894 PARD6AQ9NPB6 346 aa7.82□□□□□ -1.16
HMGB3P5-201ENST00000428894 CADPSQ9ULU8 1353 aa7.82□□□□□ -1.16
HMGB3P5-201ENST00000428894 TRIM13O60858 407 aa7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 FUCA1P04066 466 aa7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 ITGAVP06756 1048 aa7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 FBLN1P23142 703 aa7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 MBLAC2Q68D91 279 aa7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 MARCH10Q8NA82 808 aaPredicted RBP7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 NETO2Q8NC67 525 aa7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 ALG3Q92685 438 aa7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 BCAS3Q9H6U6 928 aa7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 NUDT5Q9UKK9 219 aa7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 ADAMTS20P59510 1910 aa7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 MRC2Q9UBG0 1479 aa7.81□□□□□ -1.16
HMGB3P5-201ENST00000428894 TBX1O43435 398 aa7.8□□□□□ -1.16
HMGB3P5-201ENST00000428894 ATF2P15336 505 aa7.8□□□□□ -1.16
HMGB3P5-201ENST00000428894 HOXA5P20719 270 aa7.8□□□□□ -1.16
HMGB3P5-201ENST00000428894 CYP4F3Q08477 520 aa7.8□□□□□ -1.16
HMGB3P5-201ENST00000428894 MRM1Q6IN84 353 aaKnown RBP7.8□□□□□ -1.16
HMGB3P5-201ENST00000428894 LILRA6Q6PI73 481 aa7.8□□□□□ -1.16
HMGB3P5-201ENST00000428894 ZNF227Q86WZ6 799 aa7.8□□□□□ -1.16
HMGB3P5-201ENST00000428894 NLGN1Q8N2Q7 840 aa7.8□□□□□ -1.16
HMGB3P5-201ENST00000428894 FRS2Q8WU20 508 aa7.8□□□□□ -1.16
HMGB3P5-201ENST00000428894 PEX11GQ96HA9 241 aa7.8□□□□□ -1.16
HMGB3P5-201ENST00000428894 RAPGEFL1Q9UHV5 662 aa7.8□□□□□ -1.16
HMGB3P5-201ENST00000428894 WDR62O43379 1518 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 NTRK1P04629 796 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 ASGR2P07307 311 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 NCAM1P13591 858 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 HOXC12P31275 282 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 FOXO4P98177 505 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 INF2Q27J81 1249 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 WWC2Q6AWC2 1192 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 NPLOC4Q8TAT6 608 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 DPF3Q92784 378 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 TSPAN17Q96FV3 270 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 KCNC2Q96PR1 638 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 RNF38Q9H0F5 515 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 BTG4Q9NY30 223 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 MARCH2Q9P0N8 246 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 FAN1Q9Y2M0 1017 aa7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 R3HCC1Q9Y3T6 440 aaKnown RBP7.79□□□□□ -1.16
HMGB3P5-201ENST00000428894 GJB6O95452 261 aa7.78□□□□□ -1.16
HMGB3P5-201ENST00000428894 SNRPB2P08579 225 aaKnown RBP7.78□□□□□ -1.16
HMGB3P5-201ENST00000428894 ECI1P42126 302 aa7.78□□□□□ -1.16
HMGB3P5-201ENST00000428894 RBM10P98175 930 aaKnown RBP7.78□□□□□ -1.16
HMGB3P5-201ENST00000428894 SLC43A3Q8NBI5 491 aa7.78□□□□□ -1.16
HMGB3P5-201ENST00000428894 PLEKHO2Q8TD55 490 aa7.78□□□□□ -1.16
HMGB3P5-201ENST00000428894 ZBTB7AO95365 584 aa7.77□□□□□ -1.17
HMGB3P5-201ENST00000428894 PMLP29590 882 aa7.77□□□□□ -1.17
HMGB3P5-201ENST00000428894 MC3RP41968 323 aa7.77□□□□□ -1.17
HMGB3P5-201ENST00000428894 SLC9A5Q14940 896 aa7.77□□□□□ -1.17
HMGB3P5-201ENST00000428894 IQCEQ6IPM2 695 aa7.77□□□□□ -1.17
HMGB3P5-201ENST00000428894 HNRNPLLQ8WVV9 542 aaKnown RBP7.77□□□□□ -1.17
HMGB3P5-201ENST00000428894 ST7Q9NRC1 585 aa7.77□□□□□ -1.17
HMGB3P5-201ENST00000428894 SIT1Q9Y3P8 196 aa7.77□□□□□ -1.17
HMGB3P5-201ENST00000428894 SASH1O94885 1247 aa7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 KCNJ6P48051 423 aa7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 CTSWP56202 376 aa7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 SF1Q15637 639 aaKnown RBP7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 E4F1Q66K89 784 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 ANKS3Q6ZW76 656 aa7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 EEPD1Q7L9B9 569 aa7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 TEX2Q8IWB9 1127 aa7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 LINC01356Q8N9X3 169 aa7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 DIO2Q92813 273 aa7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 C20orf173Q96LM9 149 aa7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 CCDC140Q96MF4 163 aa7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 GMLQ99445 158 aa7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 TMEFF2Q9UIK5 374 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 TIMM13Q9Y5L4 95 aaPredicted RBP7.76□□□□□ -1.17
HMGB3P5-201ENST00000428894 KRTAP9-7A8MTY7 169 aa7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 C22orf46C9J442 243 aa7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 E9PSI1 815 aa7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 ARNTLO00327 626 aa7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 MEFVO15553 781 aaPredicted RBP7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 CPP00450 1065 aa7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 PLA2G1BP04054 148 aaKnown RBP7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 SCG5P05408 212 aa7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 RPL11P62913 178 aaKnown RBP7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 CELF2-AS1Q8N7Q2 184 aa7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 TP53I13Q8NBR0 393 aaPredicted RBP7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 FNIP1Q8TF40 1166 aa7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 PMF1-BGLAPU3KQ54 211 aa7.75□□□□□ -1.17
HMGB3P5-201ENST00000428894 FFAR3O14843 346 aa7.74□□□□□ -1.17
HMGB3P5-201ENST00000428894 CAP1Q01518 475 aa7.74□□□□□ -1.17
HMGB3P5-201ENST00000428894 PRSS53Q2L4Q9 553 aa7.74□□□□□ -1.17
HMGB3P5-201ENST00000428894 B3GNT8Q7Z7M8 397 aa7.74□□□□□ -1.17
HMGB3P5-201ENST00000428894 DCP2Q8IU60 420 aaKnown RBP7.74□□□□□ -1.17
HMGB3P5-201ENST00000428894 CCDC103Q8IW40 242 aa7.74□□□□□ -1.17
HMGB3P5-201ENST00000428894 KREMEN2Q8NCW0 462 aa7.74□□□□□ -1.17
HMGB3P5-201ENST00000428894 EPN3Q9H201 632 aa7.74□□□□□ -1.17
HMGB3P5-201ENST00000428894 IGSF5Q9NSI5 407 aa7.74□□□□□ -1.17
HMGB3P5-201ENST00000428894 CEP164Q9UPV0 1460 aa7.74□□□□□ -1.17
HMGB3P5-201ENST00000428894 AGRPO00253 132 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms