RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 MS4A14Q96JA4 679 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 GPCPD1Q9NPB8 672 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 RRP15Q9Y3B9 282 aaKnown RBP16■□□□□ 0.15
ERCC3-202ENST00000426778 CASZ1Q86V15 1759 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 F8W031 263 aaPredicted RBP16■□□□□ 0.15
ERCC3-202ENST00000426778 AKR1B10O60218 316 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 TM4SF1P30408 202 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 SOGA3Q5TF21 947 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 LRRC31Q6UY01 552 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 FAM71BQ8TC56 605 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 STRCQ7RTU9 1775 aa16■□□□□ 0.15
ERCC3-202ENST00000426778 MYH1P12882 1939 aa15.99■□□□□ 0.15
ERCC3-202ENST00000426778 GRB10Q13322 594 aa15.99■□□□□ 0.15
ERCC3-202ENST00000426778 TMED8Q6PL24 325 aaPredicted RBP15.99■□□□□ 0.15
ERCC3-202ENST00000426778 KIF11P52732 1056 aa15.99■□□□□ 0.15
ERCC3-202ENST00000426778 RASSF7Q02833 373 aa15.99■□□□□ 0.15
ERCC3-202ENST00000426778 SND1Q7KZF4 910 aaKnown RBP eCLIP15.99■□□□□ 0.15
ERCC3-202ENST00000426778 AMOTL1Q8IY63 956 aa15.99■□□□□ 0.15
ERCC3-202ENST00000426778 FGFBP2Q9BYJ0 223 aa15.99■□□□□ 0.15
ERCC3-202ENST00000426778 ANKRD2Q9GZV1 360 aa15.99■□□□□ 0.15
ERCC3-202ENST00000426778 ZMYND12Q9H0C1 365 aa15.99■□□□□ 0.15
ERCC3-202ENST00000426778 NDST4Q9H3R1 872 aa15.99■□□□□ 0.15
ERCC3-202ENST00000426778 BLOC1S4Q9NUP1 217 aa15.99■□□□□ 0.15
ERCC3-202ENST00000426778 SEC63Q9UGP8 760 aaKnown RBP15.99■□□□□ 0.15
ERCC3-202ENST00000426778 PCDHA13Q9Y5I0 950 aa15.99■□□□□ 0.15
ERCC3-202ENST00000426778 EIF3CLB5ME19 914 aaKnown RBP15.98■□□□□ 0.15
ERCC3-202ENST00000426778 TNNI2P48788 182 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 VAV2P52735 878 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 ECM1Q16610 540 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 TEX11Q8IYF3 940 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 CDK5RAP3Q96JB5 506 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 EIF3CQ99613 913 aaKnown RBP15.98■□□□□ 0.15
ERCC3-202ENST00000426778 LAMB1P07942 1786 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 GNAQP50148 359 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 TDRD12Q587J7 1177 aaKnown RBP15.98■□□□□ 0.15
ERCC3-202ENST00000426778 TPTE2Q6XPS3 522 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 SRLQ86TD4 932 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 CREG2Q8IUH2 290 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 NELFCDQ8IXH7 590 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 REXO1Q8N1G1 1221 aaKnown RBP15.98■□□□□ 0.15
ERCC3-202ENST00000426778 CCDC47Q96A33 483 aaKnown RBP15.98■□□□□ 0.15
ERCC3-202ENST00000426778 CALML4Q96GE6 196 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 PNMA5Q96PV4 448 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 C6orf50Q9HD87 102 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 PACSIN2Q9UNF0 486 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-202ENST00000426778 ZC3H4Q9UPT8 1303 aaKnown RBP15.98■□□□□ 0.15
ERCC3-202ENST00000426778 ESYT3A0FGR9 886 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 BICDL2A1A5D9 508 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 ZSCAN5CA6NGD5 496 aaPredicted RBP15.98■□□□□ 0.15
ERCC3-202ENST00000426778 AGPSO00116 658 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 CALCRLQ16602 461 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 SV2BQ7L1I2 683 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 AFAP1L1Q8TED9 768 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 PSD3Q9NYI0 1048 aa15.98■□□□□ 0.15
ERCC3-202ENST00000426778 COL14A1Q05707 1796 aaKnown RBP15.97■□□□□ 0.15
ERCC3-202ENST00000426778 BAG3O95817 575 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 SLC16A2P36021 539 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 VWA3BQ502W6 1294 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 CCDC88AQ3V6T2 1871 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 ROBO1Q9Y6N7 1651 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 UTRNP46939 3433 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 COL16A1Q07092 1604 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-202ENST00000426778 NPHP3-ACAD11A0A0J9YXS1 232 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 SLC1A4P43007 532 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 SPTY2D1Q68D10 685 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-202ENST00000426778 CCNI2Q6ZMN8 369 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-202ENST00000426778 KRT25Q7Z3Z0 450 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 GOLGA6L1Q8N7Z2 621 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 SNX29Q8TEQ0 813 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
ERCC3-202ENST00000426778 C7orf25Q9BPX7 421 aa15.97■□□□□ 0.15
ERCC3-202ENST00000426778 CWC15Q9P013 229 aaKnown RBP15.97■□□□□ 0.15
ERCC3-202ENST00000426778 PRPF6O94906 941 aaKnown RBP15.96■□□□□ 0.15
ERCC3-202ENST00000426778 SLC10A5Q5PT55 438 aa15.96■□□□□ 0.15
ERCC3-202ENST00000426778 PROCA1Q8NCQ7 364 aaPredicted RBP15.96■□□□□ 0.15
ERCC3-202ENST00000426778 LARP4BQ92615 738 aaKnown RBP15.96■□□□□ 0.15
ERCC3-202ENST00000426778 ARHGEF1Q92888 912 aaKnown RBP15.96■□□□□ 0.15
ERCC3-202ENST00000426778 MTMR8Q96EF0 704 aa15.96■□□□□ 0.15
ERCC3-202ENST00000426778 LAMB2P55268 1798 aa15.96■□□□□ 0.15
ERCC3-202ENST00000426778 EDIL3O43854 480 aa15.96■□□□□ 0.15
ERCC3-202ENST00000426778 CNNM4Q6P4Q7 775 aa15.96■□□□□ 0.15
ERCC3-202ENST00000426778 CACNA2D4Q7Z3S7 1137 aa15.96■□□□□ 0.15
ERCC3-202ENST00000426778 DAGLBQ8NCG7 672 aa15.96■□□□□ 0.15
ERCC3-202ENST00000426778 DDX12PQ92771 950 aa15.96■□□□□ 0.15
ERCC3-202ENST00000426778 RTFDC1Q9BY42 306 aaPredicted RBP15.96■□□□□ 0.15
ERCC3-202ENST00000426778 ZHX3Q9H4I2 956 aa15.96■□□□□ 0.15
ERCC3-202ENST00000426778 SNX12Q9UMY4 172 aa15.96■□□□□ 0.15
ERCC3-202ENST00000426778 SIK3Q9Y2K2 1263 aa15.96■□□□□ 0.15
ERCC3-202ENST00000426778 TTBK2Q6IQ55 1244 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 NUP58Q9BVL2 599 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 SH2D4AQ9H788 454 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 NARFQ9UHQ1 456 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 PRPHP41219 470 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 MAGEA1P43355 309 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 CKAP4Q07065 602 aaKnown RBP15.95■□□□□ 0.14
ERCC3-202ENST00000426778 FAM114A1Q8IWE2 563 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 CCDC170Q8IYT3 715 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 SPATA4Q8NEY3 305 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 WDR66Q8TBY9 1149 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 ERGIC2Q96RQ1 377 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 247.9 ms