RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 A6NJR5 290 aa20.71■□□□□ 0.91
GPC1-203ENST00000425056 MYL3P08590 195 aa20.71■□□□□ 0.91
GPC1-203ENST00000425056 BRDTQ58F21 947 aaPredicted RBP20.71■□□□□ 0.91
GPC1-203ENST00000425056 PBX4Q9BYU1 374 aa20.71■□□□□ 0.91
GPC1-203ENST00000425056 MTIF3Q9H2K0 278 aaKnown RBP20.71■□□□□ 0.91
GPC1-203ENST00000425056 ZNF576Q9H609 170 aa20.71■□□□□ 0.91
GPC1-203ENST00000425056 CHD9Q3L8U1 2897 aa20.71■□□□□ 0.91
GPC1-203ENST00000425056 ARIH2O95376 493 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 SUPT20HL2P0C7V6 817 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 TXNP10599 105 aaKnown RBP20.7■□□□□ 0.9
GPC1-203ENST00000425056 CCL23P55773 120 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 TTLL4Q14679 1199 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 GRIN2CQ14957 1233 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 SEC23AQ15436 765 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 IFIT1BQ5T764 474 aaKnown RBP20.7■□□□□ 0.9
GPC1-203ENST00000425056 FBXO11Q86XK2 927 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 MCF2L2Q86YR7 1114 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 SYTL5Q8TDW5 730 aaPredicted RBP20.7■□□□□ 0.9
GPC1-203ENST00000425056 TBC1D5Q92609 795 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 COPS5Q92905 334 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 JMJD4Q9H9V9 463 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 GPHNQ9NQX3 736 aaPredicted RBP20.7■□□□□ 0.9
GPC1-203ENST00000425056 TRMT13Q9NUP7 481 aaKnown RBP20.7■□□□□ 0.9
GPC1-203ENST00000425056 CXXC1Q9P0U4 656 aaPredicted RBP20.7■□□□□ 0.9
GPC1-203ENST00000425056 COL20A1Q9P218 1284 aa20.7■□□□□ 0.9
GPC1-203ENST00000425056 SUPT16HQ9Y5B9 1047 aaKnown RBP20.7■□□□□ 0.9
GPC1-203ENST00000425056 VCANP13611 3396 aa20.69■□□□□ 0.9
GPC1-203ENST00000425056 GRXCR1A8MXD5 290 aa20.69■□□□□ 0.9
GPC1-203ENST00000425056 KPNA6O60684 536 aa20.69■□□□□ 0.9
GPC1-203ENST00000425056 FGBP02675 491 aa20.69■□□□□ 0.9
GPC1-203ENST00000425056 PBX2P40425 430 aa20.69■□□□□ 0.9
GPC1-203ENST00000425056 CCDC62Q6P9F0 684 aa20.69■□□□□ 0.9
GPC1-203ENST00000425056 NSUN6Q8TEA1 469 aaKnown RBP20.69■□□□□ 0.9
GPC1-203ENST00000425056 MRPL11Q9Y3B7 192 aaKnown RBP20.69■□□□□ 0.9
GPC1-203ENST00000425056 DHX16O60231 1041 aaKnown RBP20.68■□□□□ 0.9
GPC1-203ENST00000425056 NBPF20Q3BBV1 942 aa20.68■□□□□ 0.9
GPC1-203ENST00000425056 NFRKBQ6P4R8 1299 aa20.68■□□□□ 0.9
GPC1-203ENST00000425056 CYB5R4Q7L1T6 521 aa20.68■□□□□ 0.9
GPC1-203ENST00000425056 STAG2Q8N3U4 1231 aa20.68■□□□□ 0.9
GPC1-203ENST00000425056 VWCEQ96DN2 955 aa20.68■□□□□ 0.9
GPC1-203ENST00000425056 TAAR1Q96RJ0 339 aa20.68■□□□□ 0.9
GPC1-203ENST00000425056 IWS1Q96ST2 819 aa20.68■□□□□ 0.9
GPC1-203ENST00000425056 SCN5AQ14524 2016 aa20.67■□□□□ 0.9
GPC1-203ENST00000425056 CYP2C9P11712 490 aa20.67■□□□□ 0.9
GPC1-203ENST00000425056 GHRHRQ02643 423 aa20.67■□□□□ 0.9
GPC1-203ENST00000425056 RAB30Q15771 203 aa20.67■□□□□ 0.9
GPC1-203ENST00000425056 RUFY2Q8WXA3 655 aa20.67■□□□□ 0.9
GPC1-203ENST00000425056 MTMR8Q96EF0 704 aa20.67■□□□□ 0.9
GPC1-203ENST00000425056 SCLYQ96I15 445 aa20.67■□□□□ 0.9
GPC1-203ENST00000425056 RMDN3Q96TC7 470 aa20.67■□□□□ 0.9
GPC1-203ENST00000425056 COL25A1Q9BXS0 654 aaPredicted RBP20.67■□□□□ 0.9
GPC1-203ENST00000425056 CHD7Q9P2D1 2997 aa20.66■□□□□ 0.9
GPC1-203ENST00000425056 OPLAHO14841 1288 aa20.66■□□□□ 0.9
GPC1-203ENST00000425056 PFKMP08237 780 aa20.66■□□□□ 0.9
GPC1-203ENST00000425056 PTPN11Q06124 597 aaPredicted RBP20.66■□□□□ 0.9
GPC1-203ENST00000425056 TRDNQ13061 729 aa20.66■□□□□ 0.9
GPC1-203ENST00000425056 STXBP2Q15833 593 aa20.66■□□□□ 0.9
GPC1-203ENST00000425056 OTOP2Q7RTS6 562 aa20.66■□□□□ 0.9
GPC1-203ENST00000425056 RPUSD2Q8IZ73 545 aaKnown RBP20.66■□□□□ 0.9
GPC1-203ENST00000425056 AMNQ9BXJ7 453 aa20.66■□□□□ 0.9
GPC1-203ENST00000425056 VAT1LQ9HCJ6 419 aa20.66■□□□□ 0.9
GPC1-203ENST00000425056 MAD2L2Q9UI95 211 aa20.66■□□□□ 0.9
GPC1-203ENST00000425056 KLRF2D3W0D1 207 aa20.65■□□□□ 0.9
GPC1-203ENST00000425056 GH1P01241 217 aa20.65■□□□□ 0.9
GPC1-203ENST00000425056 CYP21A2P08686 494 aa20.65■□□□□ 0.9
GPC1-203ENST00000425056 CHMLP26374 656 aa20.65■□□□□ 0.9
GPC1-203ENST00000425056 HSD17B4P51659 736 aa20.65■□□□□ 0.9
GPC1-203ENST00000425056 ARHGAP1Q07960 439 aa20.65■□□□□ 0.9
GPC1-203ENST00000425056 FAM47CQ5HY64 1035 aa20.65■□□□□ 0.9
GPC1-203ENST00000425056 SEPT14Q6ZU15 432 aa20.65■□□□□ 0.9
GPC1-203ENST00000425056 U3KPZ7 1027 aaPredicted RBP20.65■□□□□ 0.9
GPC1-203ENST00000425056 PALM3A6NDB9 673 aaPredicted RBP20.64■□□□□ 0.89
GPC1-203ENST00000425056 PITPNM1O00562 1244 aa20.64■□□□□ 0.89
GPC1-203ENST00000425056 ZBTB5O15062 677 aa20.64■□□□□ 0.89
GPC1-203ENST00000425056 PPP1R11O60927 126 aaPredicted RBP20.64■□□□□ 0.89
GPC1-203ENST00000425056 MMP3P08254 477 aa20.64■□□□□ 0.89
GPC1-203ENST00000425056 PTH1RQ03431 593 aa20.64■□□□□ 0.89
GPC1-203ENST00000425056 LY6KQ17RY6 165 aa20.64■□□□□ 0.89
GPC1-203ENST00000425056 ARHGEF16Q5VV41 709 aa20.64■□□□□ 0.89
GPC1-203ENST00000425056 AFG1LQ8WV93 481 aa20.64■□□□□ 0.89
GPC1-203ENST00000425056 PXMP2Q9NR77 195 aa20.64■□□□□ 0.89
GPC1-203ENST00000425056 MSRAQ9UJ68 235 aa20.64■□□□□ 0.89
GPC1-203ENST00000425056 MYO9BQ13459 2157 aa20.63■□□□□ 0.89
GPC1-203ENST00000425056 CFBP00751 764 aa20.63■□□□□ 0.89
GPC1-203ENST00000425056 EIF2AK2P19525 551 aaKnown RBP20.63■□□□□ 0.89
GPC1-203ENST00000425056 PPP1R13LQ8WUF5 828 aa20.63■□□□□ 0.89
GPC1-203ENST00000425056 MAP3K20Q9NYL2 800 aaKnown RBP20.63■□□□□ 0.89
GPC1-203ENST00000425056 SLC4A7Q9Y6M7 1214 aa20.63■□□□□ 0.89
GPC1-203ENST00000425056 SGSM2O43147 1006 aa20.62■□□□□ 0.89
GPC1-203ENST00000425056 EIF3JO75822 258 aaKnown RBP20.62■□□□□ 0.89
GPC1-203ENST00000425056 NR3C2P08235 984 aa20.62■□□□□ 0.89
GPC1-203ENST00000425056 RFC2P35250 354 aa20.62■□□□□ 0.89
GPC1-203ENST00000425056 GRM4Q14833 912 aa20.62■□□□□ 0.89
GPC1-203ENST00000425056 SLC35G1Q2M3R5 365 aa20.62■□□□□ 0.89
GPC1-203ENST00000425056 SESTD1Q86VW0 696 aa20.62■□□□□ 0.89
GPC1-203ENST00000425056 SAMD3Q8N6K7 520 aa20.62■□□□□ 0.89
GPC1-203ENST00000425056 EMID1Q96A84 441 aaPredicted RBP20.62■□□□□ 0.89
GPC1-203ENST00000425056 GAS2L1Q99501 681 aaPredicted RBP20.62■□□□□ 0.89
GPC1-203ENST00000425056 YBX2Q9Y2T7 364 aaKnown RBP20.62■□□□□ 0.89
GPC1-203ENST00000425056 TAF6LQ9Y6J9 622 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms