RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CTNNA1P35221 906 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 MCAMP43121 646 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 MAGOHP61326 146 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 TRIM68Q6AZZ1 485 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 KSR1Q8IVT5 923 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 IFNL2Q8IZJ0 200 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 MAGOHBQ96A72 148 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 BORCS6Q96GS4 357 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 MTFR1LQ9H019 292 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 SPATS2LQ9NUQ6 558 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 STK38LQ9Y2H1 464 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 LGALS16A8MUM7 142 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 EHHADHQ08426 723 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 IL17AQ16552 155 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 GNPTABQ3T906 1256 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 AP1ARQ63HQ0 302 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 NBPF5PQ86XG9 351 aaPredicted RBP12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 IFT20Q8IY31 132 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 TRIM58Q8NG06 486 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 UHMK1Q8TAS1 419 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 AP1M1Q9BXS5 423 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 MMRN2Q9H8L6 949 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 ZNF532Q9HCE3 1301 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 RAD51CO43502 376 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 IL15P40933 162 aaPredicted RBP12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 MTIF2P46199 727 aaKnown RBP12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 RBM5P52756 815 aaKnown RBP eCLIP12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 PIK3AP1Q6ZUJ8 805 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 CSGALNACT2Q8N6G5 542 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 CCDC26Q8TAB7 109 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 AGAP11Q8TF27 550 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
SEC61A1-202ENST00000424880 GCOM1H8Y6P7 765 aaPredicted RBP12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 MYZAPP0CAP1 466 aa12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 KIF11P52732 1056 aa12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 CAPRIN2Q6IMN6 1127 aaKnown RBP12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 CRACR2BQ8N4Y2 399 aaPredicted RBP12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 ZNF507Q8TCN5 953 aa12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 CUL5Q93034 780 aa12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 ZNF570Q96NI8 536 aa12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 LBHD1Q9BQE6 289 aaPredicted RBP12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 NEUROG2Q9H2A3 272 aa12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 FOXP1Q9H334 677 aaPredicted RBP12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 SH2D4AQ9H788 454 aa12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 AATFQ9NY61 560 aaKnown RBP eCLIP12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 MAGEC2Q9UBF1 373 aaPredicted RBP12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 G3BP2Q9UN86 482 aaKnown RBP12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 HYOU1Q9Y4L1 999 aa12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 CD2APQ9Y5K6 639 aa12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 SPATA31A6Q5VVP1 1343 aa12.46□□□□□ -0.41
SEC61A1-202ENST00000424880 IFNAR1P17181 557 aa12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 HSD17B3P37058 310 aa12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 SLC1A4P43007 532 aa12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 KCNJ2P63252 427 aa12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 TRIM14Q14142 442 aa12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 RRAGAQ7L523 313 aa12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 ZNF579Q8NAF0 562 aaKnown RBP12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 HELBQ8NG08 1087 aaPredicted RBP12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 CAVIN3Q969G5 261 aa12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 ARMT1Q9H993 441 aa12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 ARHGEF10LQ9HCE6 1279 aa12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 PIH1D3Q9NQM4 214 aaKnown RBP12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.42
SEC61A1-202ENST00000424880 ANO9A1A5B4 782 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 TRAPPC3O43617 180 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 USO1O60763 962 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 IFNAR2P48551 515 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 EMC10Q5UCC4 262 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 CDCA2Q69YH5 1023 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 NLRC4Q9NPP4 1024 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 CPSF2Q9P2I0 782 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 CEP131Q9UPN4 1083 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 WDR17Q8IZU2 1322 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 TLDC2A0PJX2 215 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 MAGEA1P43355 309 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 CASP7P55210 303 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 RWDD2BP57060 319 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 SPAG1Q07617 926 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 TDRD12Q587J7 1177 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 MIGA1Q8NAN2 632 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 RASGRP4Q8TDF6 673 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 SAAL1Q96ER3 474 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 DCAF5Q96JK2 942 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 NOC4LQ9BVI4 516 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 EXOC1Q9NV70 894 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 MAP3K15Q6ZN16 1313 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 SEMA3EO15041 775 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 PLEKHA8P1O95397 391 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 MAP3K12Q12852 859 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 UAP1Q16222 522 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 ZC3H12AQ5D1E8 599 aaKnown RBP12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 ZNF658Q5TYW1 1059 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 GKAP1Q5VSY0 366 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 KLHDC7AQ5VTJ3 777 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 FNBP4Q8N3X1 1017 aaPredicted RBP12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 LPIN2Q92539 896 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 NAPBQ9H115 298 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 BATF3Q9NR55 127 aa12.45□□□□□ -0.42
SEC61A1-202ENST00000424880 MTMR7Q9Y216 660 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms