RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SCFD2Q8WU76 684 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 STAG1Q8WVM7 1258 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 ANKS1AQ92625 1134 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 FRAT1Q92837 279 aaPredicted RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 ATOH1Q92858 354 aaPredicted RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 MKL1Q969V6 931 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 GMCL1Q96IK5 515 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 MPHOSPH6Q99547 160 aaKnown RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 C17orf80Q9BSJ5 609 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 NSUN3Q9H649 340 aaKnown RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 IL1RAPL2Q9NP60 686 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 CLDND1Q9NY35 253 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 MTMR4Q9NYA4 1195 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 ARPP21Q9UBL0 812 aaPredicted RBP2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 PNMA2Q9UL42 364 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 SLC4A4Q9Y6R1 1079 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 GPR179Q6PRD1 2367 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 ATRXP46100 2492 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 CFAP54Q96N23 3096 aa2.82□□□□□ -1.96
RNU4-53P-201ENST00000410828 XIRP2A4UGR9 3374 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 IGKV6D-41A0A0C4DH26 115 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 RBM47A0AV96 593 aaKnown RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PTPDC1A2A3K4 754 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 MINDY4BA8MYZ0 360 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 STXBP3O00186 592 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 MBTPS2O43462 519 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PLA2G6O60733 806 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 NBNO60934 754 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 LGR5O75473 907 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PRDM1O75626 825 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 RB1P06400 928 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 IFIT2P09913 472 aaKnown RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 TSPY3P0CV98 308 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 TSPY8P0CW00 308 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 TXNP10599 105 aaKnown RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 CKBP12277 381 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 CASTP20810 708 aaKnown RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 MCCP23508 829 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 AVPR2P30518 371 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 LTBRP36941 435 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 ALDH5A1P51649 535 aaPredicted RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 NUBP1P53384 320 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 HTRA4P83105 476 aaPredicted RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PDE4BQ07343 736 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PDE4DQ08499 809 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 SIGLEC14Q08ET2 396 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 TCF15Q12870 199 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PTK7Q13308 1070 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 SMAD4Q13485 552 aaKnown RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 BAATQ14032 418 aaPredicted RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 SMAD2Q15796 467 aaKnown RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 CLUL1Q15846 466 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 EPC2Q52LR7 807 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 MUM1L1Q5H9M0 696 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PPP4R3BQ5MIZ7 849 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZKSCAN2Q63HK3 967 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 RCSD1Q6JBY9 416 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 GDF6Q6KF10 455 aaPredicted RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZSCAN25Q6NSZ9 544 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 GIMAP6Q6P9H5 292 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 RPAINQ86UA6 219 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 FBXO11Q86XK2 927 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 TMEM192Q8IY95 271 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 STK11IPQ8N1F8 1099 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 FBXL6Q8N531 539 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 TMEM57Q8N5G2 664 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 C7orf31Q8N865 590 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 DBF4BQ8NFT6 615 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 NEDD1Q8NHV4 660 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 RHPN1Q8TCX5 695 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 SP7Q8TDD2 431 aaPredicted RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PPP1R13LQ8WUF5 828 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 DHX38Q92620 1227 aaKnown RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 COPS5Q92905 334 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PPP2R3CQ969Q6 453 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 KIF1BPQ96EK5 621 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 CEP95Q96GE4 821 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PURBQ96QR8 312 aaKnown RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 YME1L1Q96TA2 773 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 C11orf84Q9BUA3 381 aaPredicted RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PUS7LQ9H0K6 701 aaKnown RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 BOLA2Q9H3K6 86 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 C1orf115Q9H7X2 142 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 FAM86C1Q9NVL1 165 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PAG1Q9NWQ8 432 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 CCPG1Q9ULG6 757 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PRR12Q9ULL5 1215 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 EXOC6BQ9Y2D4 811 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 DDX49Q9Y6V7 483 aaKnown RBP2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZBED9Q6R2W3 1325 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 EMSYQ7Z589 1322 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 TET1Q8NFU7 2136 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 PKD1L2Q7Z442 2459 aa2.81□□□□□ -1.96
RNU4-53P-201ENST00000410828 TRANK1O15050 2925 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 FASNP49327 2511 aaKnown RBP2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZNFX1Q9P2E3 1918 aaKnown RBP2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 A0A0G2JMZ2 1700 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 LRRC37A2A6NM11 1700 aa2.8□□□□□ -1.96
RNU4-53P-201ENST00000410828 GSG1L2A8MUP6 293 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms