RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 SCAPERQ9BY12 1400 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 GOLGA6L10A0A0M3HER8 536 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 B4E171 279 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 H0YC42 278 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 H7C0S8 307 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 P4HA2O15460 535 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 ZBTB14O43829 449 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 FOXD2O60548 495 aaPredicted RBP6.36□□□□□ -1.39
CNGA1-202ENST00000402813 TMEM127O75204 238 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 TMOD1P28289 359 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 ASMTP46597 345 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 KCNC4Q03721 635 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 ADCY1Q08828 1119 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 KRTCAP3Q53RY4 240 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 ZSWIM2Q8NEG5 633 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 NKX2-3Q8TAU0 364 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 MFSD14AQ96MC6 490 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 CAPS2Q9BXY5 557 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 PLSCR4Q9NRQ2 329 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 NSMCE4AQ9NXX6 385 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 RCAN3Q9UKA8 241 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 ANGPTL3Q9Y5C1 460 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 IFT140Q96RY7 1462 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 CFAP99D6REC4 459 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 PI4K2BG5E9Z4 385 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 H0Y626 953 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 BRINP1O60477 761 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 STAMBPO95630 424 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 LPOP22079 712 aaPredicted RBP6.36□□□□□ -1.39
CNGA1-202ENST00000402813 GOLGA2Q08379 1002 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 SYCP1Q15431 976 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 PTPN21Q16825 1174 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 C6orf118Q5T5N4 469 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 FAM117BQ6P1L5 589 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.36□□□□□ -1.39
CNGA1-202ENST00000402813 CNDP1Q96KN2 507 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 SGCZQ96LD1 299 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 ZNF804BA4D1E1 1349 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 SOS1Q07889 1333 aaPredicted RBP6.36□□□□□ -1.39
CNGA1-202ENST00000402813 LRPPRCP42704 1394 aaKnown RBP6.36□□□□□ -1.39
CNGA1-202ENST00000402813 CCDC7Q96M83 1385 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 DENND4BO75064 1496 aaPredicted RBP6.36□□□□□ -1.39
CNGA1-202ENST00000402813 CTNND1O60716 968 aaKnown RBP6.36□□□□□ -1.39
CNGA1-202ENST00000402813 CDKL5O76039 1030 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 TGDSO95455 350 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 EIF1AXP47813 144 aaKnown RBP6.36□□□□□ -1.39
CNGA1-202ENST00000402813 C21orf58P58505 322 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 SYDE2Q5VT97 1194 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 SPERTQ8NA61 448 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 IPMKQ8NFU5 416 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 SPDYE1Q8NFV5 336 aaPredicted RBP6.36□□□□□ -1.39
CNGA1-202ENST00000402813 CCDC114Q96M63 670 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 ESYT1Q9BSJ8 1104 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 TARS2Q9BW92 718 aaKnown RBP6.36□□□□□ -1.39
CNGA1-202ENST00000402813 LRRCC1Q9C099 1032 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 RSAD1Q9HA92 442 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.36□□□□□ -1.39
CNGA1-202ENST00000402813 ANLNQ9NQW6 1124 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 PCDHGC3Q9UN70 934 aa6.36□□□□□ -1.39
CNGA1-202ENST00000402813 CCDC141Q6ZP82 1450 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 MAGI1Q96QZ7 1491 aaPredicted RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 M0R2N6 131 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 TULP2O00295 520 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 USO1O60763 962 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 EEF2P13639 858 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 MCM4P33991 863 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 COG2Q14746 738 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 OASLQ15646 514 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 PRR16Q569H4 304 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 SLC27A3Q5K4L6 730 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 SPATC1Q76KD6 591 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 FCHSD1Q86WN1 690 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 SPATA2LQ8IUW3 424 aaPredicted RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 CCDC65Q8IXS2 484 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 PEX5LQ8IYB4 626 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 CCDC148Q8NFR7 591 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 CLIP3Q96DZ5 547 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 TREX2Q9BQ50 279 aaPredicted RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 NOL10Q9BSC4 688 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 CCDC68Q9H2F9 335 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 PDLIM7Q9NR12 457 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 ZC3H7BQ9UGR2 993 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 SH3BGRL2Q9UJC5 107 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 ZBTB21Q9ULJ3 1066 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 PTPN22Q9Y2R2 807 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 AXIN2Q9Y2T1 843 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 EIF4G3O43432 1585 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 RNF17Q9BXT8 1623 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 DNAJC25-GNG10A0A024R161 153 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 AHCYL1O43865 530 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 USP1O94782 785 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 THEGLP0DJG4 465 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 HSPA1AP0DMV8 641 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 HSPA1BP0DMV9 641 aaKnown RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 AKR1B1P15121 316 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 GNAT2P19087 354 aa6.35□□□□□ -1.39
CNGA1-202ENST00000402813 GNL1P36915 607 aaPredicted RBP6.35□□□□□ -1.39
CNGA1-202ENST00000402813 TNNT3P45378 269 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms