RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 SYNGAP1Q96PV0 1343 aa6.75□□□□□ -1.33
HMGB1P20-201ENST00000402555 PTPDC1A2A3K4 754 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 MYADML2A6NDP7 307 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 KBTBD13C9JR72 458 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 DNM1LO00429 736 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 IFIT3O14879 490 aaKnown RBP6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 DHX16O60231 1041 aaKnown RBP6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 RNF40O75150 1001 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 PARP1P09874 1014 aaKnown RBP6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 RARBP10826 455 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 AKR1A1P14550 325 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 CALML3P27482 149 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 ADCYAP1R1P41586 468 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 TRDNQ13061 729 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 ACVR2BQ13705 512 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 BAATQ14032 418 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 CDC37Q16543 378 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 SLC35G1Q2M3R5 365 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 CCDC144BQ3MJ40 725 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 BMP2KLQ5H9B9 411 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 TMEM63BQ5T3F8 832 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 GPATCH4Q5T3I0 446 aaKnown RBP6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 MAMDC4Q6UXC1 1216 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 SLC30A10Q6XR72 485 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 KIAA1211Q6ZU35 1233 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 EEPD1Q7L9B9 569 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 RALYLQ86SE5 291 aaKnown RBP6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 ADGRF4Q8IZF3 695 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 STAG2Q8N3U4 1231 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 ARRDC4Q8NCT1 418 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 CLEC4DQ8WXI8 215 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 KATNBL1Q9H079 304 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 ANO2Q9NQ90 1003 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 PDGFCQ9NRA1 345 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 NRBP1Q9UHY1 535 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 FAM184BQ9ULE4 1060 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 MYH6P13533 1939 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 SYNRGQ9UMZ2 1314 aa6.74□□□□□ -1.33
HMGB1P20-201ENST00000402555 LRRC37A2A6NM11 1700 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 SLC27A2O14975 620 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 ADAMTS4O75173 837 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 NT5C2P49902 561 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 RTP1P59025 263 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 QRICH1Q2TAL8 776 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 ASPRV1Q53RT3 343 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 TMEM67Q5HYA8 995 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 FBXO16Q8IX29 292 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 MB21D2Q8IYB1 491 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 MSL3Q8N5Y2 521 aaKnown RBP6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 NCOA7Q8NI08 942 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 TBC1D5Q92609 795 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 ZNF516Q92618 1163 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 ABHD16BQ9H3Z7 469 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 JMJD4Q9H9V9 463 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 MAD2L2Q9UI95 211 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 ATP11BQ9Y2G3 1177 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 ADGRG1Q9Y653 693 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 WDR19Q8NEZ3 1342 aa6.73□□□□□ -1.33
HMGB1P20-201ENST00000402555 A0A1W2PQ45 241 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 A0A1W2PQY0 241 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 ERICH2A1L162 156 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 ASB14A6NK59 587 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 KLRF2D3W0D1 207 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 PRC1O43663 620 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 PPP1R11O60927 126 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 CDC45O75419 566 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 NEFLP07196 543 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 C6orf222P0C671 652 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 SMPD1P17405 629 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 MAGEA10P43363 369 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 FXR1P51114 621 aaKnown RBP eCLIP6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 ALDH5A1P51649 535 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 RPS6P62753 249 aaKnown RBP6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 MDM2Q00987 491 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 BEX3Q00994 111 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 GRM4Q14833 912 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 WTAPQ15007 396 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 NECTIN1Q15223 517 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 TRIM60Q495X7 471 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 CREB3L3Q68CJ9 461 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 SLC39A5Q6ZMH5 540 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 RNF207Q6ZRF8 634 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 NOL8Q76FK4 1167 aaKnown RBP6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 RNF180Q86T96 592 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 FBXO11Q86XK2 927 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 HOMER1Q86YM7 354 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 RAB11FIP4Q86YS3 637 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 IGDCC4Q8TDY8 1250 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 PIBF1Q8WXW3 757 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 GDF15Q99988 308 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 MYL10Q9BUA6 226 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 LRRC2Q9BYS8 371 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 PRO3102Q9H379 93 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 COL20A1Q9P218 1284 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 PHF24Q9UPV7 400 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 LAMA3Q16787 3333 aa6.72□□□□□ -1.33
HMGB1P20-201ENST00000402555 PALM3A6NDB9 673 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 CTAGE5O15320 804 aa6.71□□□□□ -1.34
HMGB1P20-201ENST00000402555 DUSP11O75319 330 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms