RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 VTA1Q9NP79 307 aa20.14■□□□□ 0.81
SMIM11A-202ENST00000399295 V9GY48 417 aaPredicted RBP20.14■□□□□ 0.81
SMIM11A-202ENST00000399295 MYH6P13533 1939 aa20.14■□□□□ 0.81
SMIM11A-202ENST00000399295 DNM1LO00429 736 aa20.13■□□□□ 0.81
SMIM11A-202ENST00000399295 DUSP11O75319 330 aaKnown RBP20.13■□□□□ 0.81
SMIM11A-202ENST00000399295 CD2BP2O95400 341 aaKnown RBP20.13■□□□□ 0.81
SMIM11A-202ENST00000399295 GJC2Q5T442 439 aaPredicted RBP20.13■□□□□ 0.81
SMIM11A-202ENST00000399295 ARHGEF16Q5VV41 709 aa20.13■□□□□ 0.81
SMIM11A-202ENST00000399295 HEATR3Q7Z4Q2 680 aa20.13■□□□□ 0.81
SMIM11A-202ENST00000399295 LARP6Q9BRS8 491 aaKnown RBP20.13■□□□□ 0.81
SMIM11A-202ENST00000399295 PDGFCQ9NRA1 345 aa20.13■□□□□ 0.81
SMIM11A-202ENST00000399295 NID2Q14112 1375 aa20.12■□□□□ 0.81
SMIM11A-202ENST00000399295 ADCYAP1R1P41586 468 aa20.12■□□□□ 0.81
SMIM11A-202ENST00000399295 CCT2P78371 535 aaKnown RBP20.12■□□□□ 0.81
SMIM11A-202ENST00000399295 TNFAIP2Q03169 654 aa20.12■□□□□ 0.81
SMIM11A-202ENST00000399295 IQSEC1Q6DN90 963 aa20.12■□□□□ 0.81
SMIM11A-202ENST00000399295 TAPT1Q6NXT6 567 aa20.12■□□□□ 0.81
SMIM11A-202ENST00000399295 NOL8Q76FK4 1167 aaKnown RBP20.12■□□□□ 0.81
SMIM11A-202ENST00000399295 ZNF274Q96GC6 653 aaPredicted RBP20.12■□□□□ 0.81
SMIM11A-202ENST00000399295 IWS1Q96ST2 819 aa20.12■□□□□ 0.81
SMIM11A-202ENST00000399295 PXMP2Q9NR77 195 aa20.12■□□□□ 0.81
SMIM11A-202ENST00000399295 KBTBD13C9JR72 458 aa20.11■□□□□ 0.81
SMIM11A-202ENST00000399295 ADCY6O43306 1168 aa20.11■□□□□ 0.81
SMIM11A-202ENST00000399295 PGK1P00558 417 aa20.11■□□□□ 0.81
SMIM11A-202ENST00000399295 EIF2AK2P19525 551 aaKnown RBP20.11■□□□□ 0.81
SMIM11A-202ENST00000399295 LRRC41Q15345 812 aa20.11■□□□□ 0.81
SMIM11A-202ENST00000399295 RNF180Q86T96 592 aa20.11■□□□□ 0.81
SMIM11A-202ENST00000399295 FCHSD1Q86WN1 690 aa20.11■□□□□ 0.81
SMIM11A-202ENST00000399295 CUL5Q93034 780 aa20.11■□□□□ 0.81
SMIM11A-202ENST00000399295 TNRC18O15417 2968 aaPredicted RBP20.11■□□□□ 0.81
SMIM11A-202ENST00000399295 LCTP09848 1927 aa20.11■□□□□ 0.81
SMIM11A-202ENST00000399295 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 HSP90AA1P07900 732 aaKnown RBP20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 COL6A1P12109 1028 aa20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 STXBP2Q15833 593 aa20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 WWC2Q6AWC2 1192 aa20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 GPKOWQ92917 476 aaPredicted RBP eCLIP20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 ZSCAN31Q96LW9 406 aaPredicted RBP20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 PSTPIP2Q9H939 334 aa20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 SPC25Q9HBM1 224 aa20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 NCOA5Q9HCD5 579 aaKnown RBP20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 PCDH10Q9P2E7 1040 aa20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 LIMCH1Q9UPQ0 1083 aa20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 NR2E3Q9Y5X4 410 aa20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 MCM3APO60318 1980 aa20.1■□□□□ 0.81
SMIM11A-202ENST00000399295 SYNRGQ9UMZ2 1314 aa20.09■□□□□ 0.81
SMIM11A-202ENST00000399295 PIK3CDO00329 1044 aa20.09■□□□□ 0.81
SMIM11A-202ENST00000399295 ADAMTS4O75173 837 aa20.09■□□□□ 0.81
SMIM11A-202ENST00000399295 NR3C2P08235 984 aa20.09■□□□□ 0.81
SMIM11A-202ENST00000399295 SMPD1P17405 629 aa20.09■□□□□ 0.81
SMIM11A-202ENST00000399295 AK2P54819 239 aa20.09■□□□□ 0.81
SMIM11A-202ENST00000399295 USP17L6PQ6QN14 398 aa20.09■□□□□ 0.81
SMIM11A-202ENST00000399295 SMARCC2Q8TAQ2 1214 aa20.09■□□□□ 0.81
SMIM11A-202ENST00000399295 DPF3Q92784 378 aa20.09■□□□□ 0.81
SMIM11A-202ENST00000399295 WDR11Q9BZH6 1224 aa20.09■□□□□ 0.81
SMIM11A-202ENST00000399295 SENP6Q9GZR1 1112 aaPredicted RBP20.09■□□□□ 0.81
SMIM11A-202ENST00000399295 RBM47A0AV96 593 aaKnown RBP20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 hCG_1984214I3L0E3 225 aa20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 MEIS2O14770 477 aa20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 PRPF3O43395 683 aaKnown RBP20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 NAPAP54920 295 aa20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 GJA9P57773 515 aa20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 AKAP17AQ02040 695 aaKnown RBP20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 STK3Q13188 491 aa20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 NTRK3Q16288 839 aa20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 ZNF713Q8N859 430 aaPredicted RBP20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 PHKBQ93100 1093 aa20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 PDCD2LQ9BRP1 358 aa20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 SH2B1Q9NRF2 756 aaPredicted RBP20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 RBM27Q9P2N5 1060 aaKnown RBP20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 GNEQ9Y223 722 aaKnown RBP20.08■□□□□ 0.81
SMIM11A-202ENST00000399295 CPLX1O14810 134 aa20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 EIF3JO75822 258 aaKnown RBP20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 C6orf222P0C671 652 aaPredicted RBP20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 MYCLP12524 364 aaPredicted RBP20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 IFNAR1P17181 557 aa20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 PFKFB3Q16875 520 aaPredicted RBP20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 DUSP28Q4G0W2 176 aa20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 TMEM63BQ5T3F8 832 aa20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 PPP1R18Q6NYC8 613 aa20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 SEPT14Q6ZU15 432 aa20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 KLHDC9Q8NEP7 349 aa20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 SCFD2Q8WU76 684 aa20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 TMX3Q96JJ7 454 aa20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 AP5M1Q9H0R1 490 aa20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 UPF3AQ9H1J1 476 aaKnown RBP20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 BARHL2Q9NY43 387 aa20.07■□□□□ 0.8
SMIM11A-202ENST00000399295 FRMPD3Q5JV73 1810 aa20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 STXBP3O00186 592 aa20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 DYNC1LI2O43237 492 aaPredicted RBP20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 PPFIA3O75145 1194 aa20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 SCG2P13521 617 aa20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 PGM5Q15124 567 aa20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 TYW1BQ6NUM6 668 aa20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 TLK2Q86UE8 772 aa20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 VSIG10LQ86VR7 867 aa20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 TSEN34Q9BSV6 310 aaKnown RBP20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 SLC26A6Q9BXS9 759 aa20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 RNF26Q9BY78 433 aaPredicted RBP20.06■□□□□ 0.8
SMIM11A-202ENST00000399295 TPCN1Q9ULQ1 816 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms