RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 SMCHD1A6NHR9 2005 aa7.71□□□□□ -1.17
CX3CR1-202ENST00000399220 PVALEFA0A1B0GWK0 134 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 IRF6O14896 467 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 PRR29P0C7W0 189 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 YBX3P16989 372 aaKnown RBP eCLIP7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 MYL5Q02045 173 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 TMEM266Q2M3C6 531 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 TBC1D10BQ4KMP7 808 aaPredicted RBP7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 ZNF658Q5TYW1 1059 aaPredicted RBP7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 ANGEL2Q5VTE6 544 aaKnown RBP7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 RBM46Q8TBY0 533 aaKnown RBP7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 DDX25Q9UHL0 483 aaKnown RBP7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 ASTN2O75129 1339 aaPredicted RBP7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 ARID2Q68CP9 1835 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 PPP1R3GB7ZBB8 358 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 USP2O75604 605 aaPredicted RBP7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 ARHGAP4P98171 946 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 SETQ01105 290 aaPredicted RBP7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 GRB10Q13322 594 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 LETM2Q2VYF4 491 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 JAKMIP3Q5VZ66 844 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 CABP7Q86V35 215 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 MCF2L2Q86YR7 1114 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 ZNF280CQ8ND82 737 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 PNMA5Q96PV4 448 aa7.71□□□□□ -1.18
CX3CR1-202ENST00000399220 FRMD3A2A2Y4 597 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 LRRC10BA6NIK2 292 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 PPP2R5CQ13362 524 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 CDKAL1Q5VV42 579 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 ARHGAP27Q6ZUM4 889 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 RNF214Q8ND24 703 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 LRRC15Q8TF66 581 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 SLC5A5Q92911 643 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 NUP88Q99567 741 aaPredicted RBP7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 POLR3CQ9BUI4 534 aaPredicted RBP7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 NT5C3AQ9H0P0 336 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 BLOC1S4Q9NUP1 217 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 VAV3Q9UKW4 847 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 GCOM1H8Y6P7 765 aaPredicted RBP7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 FOXN1O15353 648 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 TDP2O95551 362 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 POLR2MP0CAP2 368 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 VCAM1P19320 739 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 INPP5BP32019 993 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 PSMD2Q13200 908 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 UBE2SQ16763 222 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 CATSPERGQ6ZRH7 1159 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 MIGA2Q7L4E1 593 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 GIMAP8Q8ND71 665 aaPredicted RBP7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 DHX58Q96C10 678 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 GLIS2Q9BZE0 524 aaPredicted RBP7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 RWDD2AQ9UIY3 292 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 SIP14410 1827 aa7.7□□□□□ -1.18
CX3CR1-202ENST00000399220 DSG3P32926 999 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 GTF2F1P35269 517 aaKnown RBP eCLIP7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 EPS15P42566 896 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 KCNJ6P48051 423 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 TPM4P67936 248 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 AMPD3Q01432 767 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 ATP2B2Q01814 1243 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 SPECC1Q5M775 1068 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 RRAGBQ5VZM2 374 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 LDHDQ86WU2 507 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 PIBF1Q8WXW3 757 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 MED15Q96RN5 788 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 GGA3Q9NZ52 723 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 KCNH4Q9UQ05 1017 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 ZKSCAN5Q9Y2L8 839 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 SNCAIPQ9Y6H5 919 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 GJA3Q9Y6H8 435 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 KIAA1217Q5T5P2 1943 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 GOLGA6L19H0YKK7 550 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 MEIS1O00470 390 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 RPN1P04843 607 aaKnown RBP7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 UBA7P41226 1012 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 STAT6P42226 847 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 APTXQ7Z2E3 356 aaKnown RBP7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 PROCA1Q8NCQ7 364 aaPredicted RBP7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 NEK9Q8TD19 979 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 TMEM174Q8WUU8 243 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 RAD54LQ92698 747 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 LRWD1Q9UFC0 647 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 TRPM7Q96QT4 1865 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 LMOD1P29536 600 aaPredicted RBP7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 MAP3K9P80192 1104 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 PPATQ06203 517 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 SPATA1Q5VX52 437 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 PCNX4Q63HM2 1172 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 ZC3H3Q8IXZ2 948 aaKnown RBP7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 ADSSL1Q8N142 457 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 CALML4Q96GE6 196 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 TRIM9Q9C026 710 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 TUFT1Q9NNX1 390 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 UBIAD1Q9Y5Z9 338 aa7.69□□□□□ -1.18
CX3CR1-202ENST00000399220 LOC102724159A0A0B4J2E5 919 aa7.68□□□□□ -1.18
CX3CR1-202ENST00000399220 SPDYE3A6NKU9 549 aa7.68□□□□□ -1.18
CX3CR1-202ENST00000399220 GOLGA6L6A8MZA4 724 aa7.68□□□□□ -1.18
CX3CR1-202ENST00000399220 USP17L15C9J2P7 530 aa7.68□□□□□ -1.18
CX3CR1-202ENST00000399220 USP17L13C9JLJ4 530 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms