RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 TTC25Q96NG3 672 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 USP26Q9BXU7 913 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 PARVBQ9HBI1 364 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 ST7Q9NRC1 585 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 NDE1Q9NXR1 346 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 AATFQ9NY61 560 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRPS1-203ENST00000395715 SLC4A4Q9Y6R1 1079 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 TRIM69Q86WT6 500 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 MTERF3Q96E29 417 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 QKIQ96PU8 341 aaKnown RBP eCLIP8.65□□□□□ -1.022e-7■■■■■ 32.9
TRPS1-203ENST00000395715 ASPSCR1Q9BZE9 553 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 UBN1Q9NPG3 1134 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 TRIM33Q9UPN9 1127 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 TRPC6Q9Y210 931 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 MYO1CO00159 1063 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 DLGAP3O95886 979 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 RUNX1T1Q06455 604 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 KLC3Q6P597 504 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 USE1Q9NZ43 259 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 GAPVD1Q14C86 1478 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 HEXIM1O94992 359 aaKnown RBP8.65□□□□□ -1.02
TRPS1-203ENST00000395715 SPOUT1Q5T280 376 aaKnown RBP8.65□□□□□ -1.02
TRPS1-203ENST00000395715 C11orf88Q6PI97 169 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 CADPS2Q86UW7 1296 aa8.65□□□□□ -1.02
TRPS1-203ENST00000395715 METTL14Q9HCE5 456 aaKnown RBP8.65□□□□□ -1.02
TRPS1-203ENST00000395715 RBM8AQ9Y5S9 174 aaKnown RBP8.65□□□□□ -1.02
TRPS1-203ENST00000395715 WDR91A4D1P6 747 aa8.65□□□□□ -1.03
TRPS1-203ENST00000395715 CPP00450 1065 aa8.65□□□□□ -1.03
TRPS1-203ENST00000395715 MCMDC2Q4G0Z9 681 aa8.65□□□□□ -1.03
TRPS1-203ENST00000395715 CATSPER1Q8NEC5 780 aa8.65□□□□□ -1.03
TRPS1-203ENST00000395715 ARHGEF1Q92888 912 aaKnown RBP8.65□□□□□ -1.03
TRPS1-203ENST00000395715 NSMCE4AQ9NXX6 385 aa8.65□□□□□ -1.03
TRPS1-203ENST00000395715 TRIM27P14373 513 aa8.65□□□□□ -1.03
TRPS1-203ENST00000395715 NLRP12P59046 1061 aa8.65□□□□□ -1.03
TRPS1-203ENST00000395715 YWHAEP62258 255 aaKnown RBP8.65□□□□□ -1.03
TRPS1-203ENST00000395715 TDRD7Q8NHU6 1098 aaKnown RBP8.65□□□□□ -1.03
TRPS1-203ENST00000395715 SNX19Q92543 992 aa8.65□□□□□ -1.03
TRPS1-203ENST00000395715 ZNF644Q9H582 1327 aaPredicted RBP8.65□□□□□ -1.03
TRPS1-203ENST00000395715 MRPL44Q9H9J2 332 aaKnown RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 PTPRCP08575 1304 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 TRIM37O94972 964 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 GNA14O95837 355 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 TSHZ3Q63HK5 1081 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 NUGGCQ68CJ6 796 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 PODNQ7Z5L7 613 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 RABGGTAQ92696 567 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 CCDC51Q96ER9 411 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 AGBL1Q96MI9 1066 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 TCEANC2Q96MN5 208 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 ANKRD2Q9GZV1 360 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 SLC12A5Q9H2X9 1139 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 PKD2L2Q9NZM6 624 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 ATP8A1Q9Y2Q0 1164 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 BIRC5O15392 142 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 ANP32DO95626 131 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 PUDPQ08623 228 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 SLFN5Q08AF3 891 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 PPP1R42Q7Z4L9 355 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 PCGF5Q86SE9 256 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 U2AF1L4Q8WU68 220 aaKnown RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 NELFBQ8WX92 580 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 TAB2Q9NYJ8 693 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 GJA3Q9Y6H8 435 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 SEC24DO94855 1032 aaPredicted RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 NR1D1P20393 614 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 MORF4L2Q15014 288 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 TRIM16LQ309B1 348 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 GPIHBP1Q8IV16 184 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 DENND6AQ8IWF6 608 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 PARP9Q8IXQ6 854 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 FAM207AQ9NSI2 230 aaPredicted RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 SYNDIG1LA6NDD5 238 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 ZBTB18Q99592 522 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 CXorf56Q9H5V9 222 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 ZNF215Q9UL58 517 aaPredicted RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 KCNH3Q9ULD8 1083 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 GMEB1Q9Y692 573 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 MRPS35P82673 323 aaKnown RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 KRR1Q13601 381 aaKnown RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 ZGPATQ8N5A5 531 aaKnown RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 DEPDC1BQ8WUY9 529 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 NARS2Q96I59 477 aaKnown RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 UBE2OQ9C0C9 1292 aaKnown RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 NOD1Q9Y239 953 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 HNRNPH2P55795 449 aaKnown RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 SPOPLQ6IQ16 392 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 ELMSAN1Q6PJG2 1045 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 HEATR4Q86WZ0 1026 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 ZNF555Q8NEP9 628 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 C8orf37Q96NL8 207 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 STK24Q9Y6E0 443 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 SBNO1A3KN83 1393 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 XRCC5P13010 732 aaKnown RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 HDLBPQ00341 1268 aaKnown RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 PTPROQ16827 1216 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 LETM2Q2VYF4 491 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 AARS2Q5JTZ9 985 aaKnown RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 STAG2Q8N3U4 1231 aa8.64□□□□□ -1.03
TRPS1-203ENST00000395715 OTUB1Q96FW1 271 aaPredicted RBP8.64□□□□□ -1.03
TRPS1-203ENST00000395715 HINFPQ9BQA5 517 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms