RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 XAB2Q9HCS7 855 aaKnown RBP16.95■□□□□ 0.3
SPOCK1-202ENST00000394945 EIF3HO15372 352 aaKnown RBP eCLIP16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 PDE6AP16499 860 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 TFAP4Q01664 338 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 NYAP1Q6ZVC0 841 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 TUBB6Q9BUF5 446 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 SAP30BPQ9UHR5 308 aaKnown RBP16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 ZNF148Q9UQR1 794 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 MAEAQ7L5Y9 396 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 SMCR8Q8TEV9 937 aaPredicted RBP16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 RIN2Q8WYP3 895 aaPredicted RBP16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 ZSCAN10Q96SZ4 725 aaPredicted RBP16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 OSBPL1AQ9BXW6 950 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 PANK4Q9NVE7 773 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 PABPN1LA6NDY0 278 aaKnown RBP16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 CCNE1P24864 410 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 SMTNP53814 917 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 AFAP1L2Q8N4X5 818 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 PITPNM3Q9BZ71 974 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 MAGEF1Q9HAY2 307 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 GJB4Q9NTQ9 266 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 CFAP73A6NFT4 308 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 FMNL1O95466 1100 aaPredicted RBP16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 MMP1P03956 469 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 ESRRAP11474 423 aaPredicted RBP16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 CDC25AP30304 524 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 CYP2J2P51589 502 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 DRP2Q13474 957 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 TMED2Q15363 201 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 CCDC93Q567U6 631 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 TMTC3Q6ZXV5 915 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 NLRP7Q8WX94 980 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 RSAD2Q8WXG1 361 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 THAP9Q9H5L6 903 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 BIN2Q9UBW5 565 aaPredicted RBP16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 PCDHB6Q9Y5E3 794 aa16.94■□□□□ 0.3
SPOCK1-202ENST00000394945 RASSF10A6NK89 507 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 CCDC188H7C350 402 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 TEX33O43247 280 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 ZWINTO95229 277 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 MAN1A1P33908 653 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 ARHGAP4P98171 946 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 RESP18Q5W5W9 173 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 GLT8D2Q9H1C3 349 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 PKD2L1Q9P0L9 805 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 KDRP35968 1356 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 MED23Q9ULK4 1368 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 TRPA1O75762 1119 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 ESRRGP62508 458 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 CUEDC2Q9H467 287 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 KCNQ3O43525 872 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 TRIM37O94972 964 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 LMNAP02545 664 aaKnown RBP16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 TRAPPC10P48553 1259 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 IRAK1P51617 712 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 MAST3O60307 1309 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 TARSL2A2RTX5 802 aaKnown RBP16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 TOM1O60784 492 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 FAM133AQ8N9E0 248 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 RNF26Q9BY78 433 aaPredicted RBP16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 AATFQ9NY61 560 aaKnown RBP eCLIP16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 ADAMTS1Q9UHI8 967 aa16.93■□□□□ 0.3
SPOCK1-202ENST00000394945 CHGBP05060 677 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 HARSP12081 509 aaKnown RBP16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 ATF7P17544 494 aaPredicted RBP16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 EIF6P56537 245 aaKnown RBP16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 HDLBPQ00341 1268 aaKnown RBP16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 FKBP3Q00688 224 aaKnown RBP16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 DR1Q01658 176 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 LLGL1Q15334 1064 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 CEP70Q8NHQ1 597 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 CXorf38Q8TB03 319 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 DPF2Q92785 391 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 CCT8L2Q96SF2 557 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 PTCH1Q13635 1447 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 HSPA6P17066 643 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 LMNB1P20700 586 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 PPP2R5DQ14738 602 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 NEK8Q86SG6 692 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 IL17RAQ96F46 866 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 PARP3Q9Y6F1 533 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 USP17L12C9JPN9 530 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 USP17L21D6R901 530 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 ECEL1O95672 775 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 PHEXP78562 749 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 SLC30A9Q6PML9 568 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 ZNF354CQ86Y25 554 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 CHMP6Q96FZ7 201 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 DYDC2Q96IM9 177 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 CYTH2Q99418 400 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 HAUS2Q9NVX0 235 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 FHOD1Q9Y613 1164 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 KDM3AQ9Y4C1 1321 aa16.92■□□□□ 0.3
SPOCK1-202ENST00000394945 OGFOD1Q8N543 542 aa16.91■□□□□ 0.3
SPOCK1-202ENST00000394945 SH2D3CQ8N5H7 860 aa16.91■□□□□ 0.3
SPOCK1-202ENST00000394945 CCT6BQ92526 530 aa16.91■□□□□ 0.3
SPOCK1-202ENST00000394945 GPKOWQ92917 476 aaPredicted RBP eCLIP16.91■□□□□ 0.3
SPOCK1-202ENST00000394945 SIRT1Q96EB6 747 aa16.91■□□□□ 0.3
SPOCK1-202ENST00000394945 NDST4Q9H3R1 872 aa16.91■□□□□ 0.3
SPOCK1-202ENST00000394945 PCDHA12Q9UN75 941 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms