RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PIGSQ96S52 555 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 AMNQ9BXJ7 453 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 KIAA1468Q9P260 1216 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 CDC23Q9UJX2 597 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 STK24Q9Y6E0 443 aa6.29□□□□□ -1.4
RFFL-202ENST00000394597 LRRC37A3O60309 1634 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 FLT1P17948 1338 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 SALL1Q9NSC2 1324 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 SMIM24O75264 130 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 CHRM1P11229 460 aaPredicted RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 BMP3P12645 472 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 CCT6AP40227 531 aaKnown RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 NDUFA8P51970 172 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 POSTNQ15063 836 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 PPP1R7Q15435 360 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 WHAMMP3Q1A5X7 153 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 NYAP1Q6ZVC0 841 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 LMNTD2Q8IXW0 634 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 DCPSQ96C86 337 aaKnown RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 CLIC6Q96NY7 704 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 NAA15Q9BXJ9 866 aaKnown RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 SH3GLB2Q9NR46 395 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 GJB4Q9NTQ9 266 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 SERTAD1Q9UHV2 236 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 MRPL11Q9Y3B7 192 aaKnown RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 RIC1Q4ADV7 1423 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 N4BP3O15049 544 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 USO1O60763 962 aaKnown RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 TBC1D8O95759 1140 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 GRM4Q14833 912 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 PFKFB3Q16875 520 aaPredicted RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 CCDC40Q4G0X9 1142 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 CDC42EP5Q6NZY7 148 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 MLKLQ8NB16 471 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 MXD3Q9BW11 206 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 PPP1R12CQ9BZL4 782 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 FTOQ9C0B1 505 aaKnown RBP eCLIP6.28□□□□□ -1.4
RFFL-202ENST00000394597 OSBPL5Q9H0X9 879 aaPredicted RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 PPANQ9NQ55 473 aaKnown RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 ZNF446Q9NWS9 450 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 AP5Z1O43299 807 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 GCFC2P16383 781 aaKnown RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 SLC16A2P36021 539 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 HDLBPQ00341 1268 aaKnown RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 DBN1Q16643 649 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 SUPT20HL1Q3ZLR7 823 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 SARM1Q6SZW1 724 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 MIGA2Q7L4E1 593 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 TRMT1LQ7Z2T5 733 aaKnown RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 CABP7Q86V35 215 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 SULF1Q8IWU6 871 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 LUC7LQ9NQ29 371 aaKnown RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 PNMA2Q9UL42 364 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.28□□□□□ -1.4
RFFL-202ENST00000394597 STRCP1A6NGW2 1772 aa6.28□□□□□ -1.4
RFFL-202ENST00000394597 PNMA6FA0A0J9YX94 578 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 ENO4A6NNW6 628 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 USP17L5A8MUK1 530 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 FOSP01100 380 aaPredicted RBP6.27□□□□□ -1.41
RFFL-202ENST00000394597 GH2P01242 217 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 CLTAP09496 248 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 LONP1P36776 959 aaKnown RBP6.27□□□□□ -1.41
RFFL-202ENST00000394597 PPP1R2P41236 205 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 MMP14P50281 582 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 STX17P56962 302 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 GOLGA8FQ08AF8 430 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 GOLGA8DPQ0D2H9 430 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 HAUS3Q68CZ6 603 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 PPP4R3AQ6IN85 833 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 C15orf52Q6ZUT6 534 aaKnown RBP6.27□□□□□ -1.41
RFFL-202ENST00000394597 SPICE1Q8N0Z3 855 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 IFT81Q8WYA0 676 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 YIPF3Q9GZM5 350 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 SERPINA10Q9UK55 444 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 CSADQ9Y600 493 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 USP54Q70EL1 1684 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 BICDL2A1A5D9 508 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 WTIPA6NIX2 430 aaPredicted RBP6.27□□□□□ -1.41
RFFL-202ENST00000394597 LAD1O00515 517 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 OR52Z1P0C646 297 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 LACTBP83111 547 aaPredicted RBP6.27□□□□□ -1.41
RFFL-202ENST00000394597 MXRA7P84157 204 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 CCDC6Q16204 474 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 LRRC23Q53EV4 343 aaPredicted RBP6.27□□□□□ -1.41
RFFL-202ENST00000394597 RSBN1LQ6PCB5 846 aaPredicted RBP6.27□□□□□ -1.41
RFFL-202ENST00000394597 C16orf86Q6ZW13 317 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 ADGRA1Q86SQ6 560 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 SNX29Q8TEQ0 813 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 DCAF4Q8WV16 495 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 TAF4BQ92750 862 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 COA7Q96BR5 231 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 FAM205AQ6ZU69 1335 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 GCOM1H8Y6P7 765 aaPredicted RBP6.27□□□□□ -1.41
RFFL-202ENST00000394597 KRT86O43790 486 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 ENTPD3O75355 529 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 POLR2MP0CAP2 368 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 AKR1B1P15121 316 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 PSEN1P49768 467 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 TGFB2P61812 414 aa6.27□□□□□ -1.41
RFFL-202ENST00000394597 CCZ1BP86790 482 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms