RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 TADA2BQ86TJ2 420 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 CEP57Q86XR8 500 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 ZNF34Q8IZ26 560 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 TNS3Q68CZ2 1445 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 MYH2Q9UKX2 1941 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 KCNK3O14649 394 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 PRPF6O94906 941 aaKnown RBP18.55■□□□□ 0.56
SIPA1-201ENST00000394224 TRIM14Q14142 442 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 KIAA0753Q2KHM9 967 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 OTUD6BQ8N6M0 293 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 NSUN4Q96CB9 384 aaKnown RBP18.55■□□□□ 0.56
SIPA1-201ENST00000394224 DPH5Q9H2P9 285 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 CHORDC1Q9UHD1 332 aaPredicted RBP18.55■□□□□ 0.56
SIPA1-201ENST00000394224 SNX12Q9UMY4 172 aa18.55■□□□□ 0.56
SIPA1-201ENST00000394224 N4BP2Q86UW6 1770 aaPredicted RBP18.54■□□□□ 0.56
SIPA1-201ENST00000394224 MEIS1O00470 390 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 LONP1P36776 959 aaKnown RBP18.54■□□□□ 0.56
SIPA1-201ENST00000394224 VAV2P52735 878 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 SLC35G1Q2M3R5 365 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 DCAF17Q5H9S7 520 aaPredicted RBP18.54■□□□□ 0.56
SIPA1-201ENST00000394224 RCSD1Q6JBY9 416 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 KIAA0895Q8NCT3 520 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 SNX29Q8TEQ0 813 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 CALML4Q96GE6 196 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 JPH2Q9BR39 696 aaPredicted RBP18.54■□□□□ 0.56
SIPA1-201ENST00000394224 MPHOSPH10O00566 681 aaKnown RBP18.54■□□□□ 0.56
SIPA1-201ENST00000394224 KLRC4O43908 158 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 TMOD1P28289 359 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 ACTN3Q08043 901 aaPredicted RBP18.54■□□□□ 0.56
SIPA1-201ENST00000394224 TBC1D10BQ4KMP7 808 aaPredicted RBP18.54■□□□□ 0.56
SIPA1-201ENST00000394224 CCDC113Q9H0I3 377 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 CEP104O60308 925 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 CALM1P0DP23 149 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 CALM2P0DP24 149 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 CALM3P0DP25 149 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 SRGNP10124 158 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 IL6STP40189 918 aaPredicted RBP18.54■□□□□ 0.56
SIPA1-201ENST00000394224 CORO7P57737 925 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 TTMPQ5BVD1 217 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 KIRREL3Q8IZU9 778 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 DNAJC7Q99615 494 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 FGFBP2Q9BYJ0 223 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 SEC63Q9UGP8 760 aaKnown RBP18.54■□□□□ 0.56
SIPA1-201ENST00000394224 MKRN1Q9UHC7 482 aaKnown RBP18.54■□□□□ 0.56
SIPA1-201ENST00000394224 FAM184BQ9ULE4 1060 aa18.54■□□□□ 0.56
SIPA1-201ENST00000394224 PLEKHG2Q9H7P9 1386 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 PNPLA7Q6ZV29 1317 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 LRRC10BA6NIK2 292 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 CALML3P27482 149 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 KCNK18Q7Z418 384 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 ZNF507Q8TCN5 953 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 UBLCP1Q8WVY7 318 aaPredicted RBP18.53■□□□□ 0.56
SIPA1-201ENST00000394224 LSM14BQ9BX40 385 aaKnown RBP18.53■□□□□ 0.56
SIPA1-201ENST00000394224 MYH15Q9Y2K3 1946 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 LOC102724428A0A0B4J2F2 783 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 MYMKA6NI61 221 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 OR52Z1P0C646 297 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 SIK1P57059 783 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 CHADLQ6NUI6 762 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 PTF1AQ7RTS3 328 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 PSD3Q9NYI0 1048 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 CCNE1P24864 410 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 EEF1GP26641 437 aaKnown RBP18.53■□□□□ 0.56
SIPA1-201ENST00000394224 WDR93Q6P2C0 686 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 SV2BQ7L1I2 683 aa18.53■□□□□ 0.56
SIPA1-201ENST00000394224 RNPC3Q96LT9 517 aaKnown RBP18.53■□□□□ 0.56
SIPA1-201ENST00000394224 ITIH6Q6UXX5 1313 aa18.52■□□□□ 0.56
SIPA1-201ENST00000394224 MST1RQ04912 1400 aa18.52■□□□□ 0.56
SIPA1-201ENST00000394224 NBPF5PQ86XG9 351 aaPredicted RBP18.52■□□□□ 0.56
SIPA1-201ENST00000394224 TMEM47Q9BQJ4 181 aa18.52■□□□□ 0.56
SIPA1-201ENST00000394224 IKZF4Q9H2S9 585 aa18.52■□□□□ 0.56
SIPA1-201ENST00000394224 EHBP1Q8NDI1 1231 aa18.52■□□□□ 0.56
SIPA1-201ENST00000394224 BCAS3Q9H6U6 928 aa18.52■□□□□ 0.56
SIPA1-201ENST00000394224 STIM2Q9P246 746 aa18.52■□□□□ 0.56
SIPA1-201ENST00000394224 MYH13Q9UKX3 1938 aa18.52■□□□□ 0.55
SIPA1-201ENST00000394224 SFI1A8K8P3 1242 aa18.51■□□□□ 0.55
SIPA1-201ENST00000394224 PLS1Q14651 629 aa18.51■□□□□ 0.55
SIPA1-201ENST00000394224 MIIPQ5JXC2 388 aa18.51■□□□□ 0.55
SIPA1-201ENST00000394224 GIMAP8Q8ND71 665 aaPredicted RBP18.51■□□□□ 0.55
SIPA1-201ENST00000394224 TRIM58Q8NG06 486 aa18.51■□□□□ 0.55
SIPA1-201ENST00000394224 MYO1AQ9UBC5 1043 aa18.51■□□□□ 0.55
SIPA1-201ENST00000394224 GGT7Q9UJ14 662 aa18.51■□□□□ 0.55
SIPA1-201ENST00000394224 CAMTA1Q9Y6Y1 1673 aa18.51■□□□□ 0.55
SIPA1-201ENST00000394224 PDS5AQ29RF7 1337 aaKnown RBP18.51■□□□□ 0.55
SIPA1-201ENST00000394224 FAM196BA6NMK8 535 aa18.51■□□□□ 0.55
SIPA1-201ENST00000394224 SEMA3EO15041 775 aa18.51■□□□□ 0.55
SIPA1-201ENST00000394224 KLRC1P26715 233 aa18.51■□□□□ 0.55
SIPA1-201ENST00000394224 ZNF512BQ96KM6 892 aaPredicted RBP18.51■□□□□ 0.55
SIPA1-201ENST00000394224 CD248Q9HCU0 757 aa18.51■□□□□ 0.55
SIPA1-201ENST00000394224 USP17L5A8MUK1 530 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 SLC37A4O43826 429 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 BUB1BO60566 1050 aaPredicted RBP18.5■□□□□ 0.55
SIPA1-201ENST00000394224 ABCB4P21439 1286 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 VWA3BQ502W6 1294 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 PAPD7Q5XG87 772 aaKnown RBP18.5■□□□□ 0.55
SIPA1-201ENST00000394224 IQCEQ6IPM2 695 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 C4orf32Q8N8J7 132 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 SCLT1Q96NL6 688 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 DDX47Q9H0S4 455 aaKnown RBP18.5■□□□□ 0.55
SIPA1-201ENST00000394224 EIF4E1BA6NMX2 242 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms