RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 ST7Q9NRC1 585 aa9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 V9GYY5 206 aaPredicted RBP9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 PDCD11Q14690 1871 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 CYP3A7-CYP3A51PA0A087WV96 503 aa9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 TTLL1O95922 423 aa9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 CYP3A7P24462 503 aa9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 SMARCA1P28370 1054 aa9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 HOXA13P31271 388 aaPredicted RBP9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 ZC3H3Q8IXZ2 948 aaKnown RBP9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 MKNK2Q9HBH9 465 aa9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 SIK3Q9Y2K2 1263 aa9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 MCM6Q14566 821 aa9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 SYNE3Q6ZMZ3 975 aa9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 PSMD1Q99460 953 aa9.58□□□□□ -0.88
GAPVD1-204ENST00000394083 TRIP12Q14669 1992 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 UQCRHLA0A096LP55 91 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 CCNT1O60563 726 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 UQCRHP07919 91 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 ITGB5P18084 799 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.881e-6■■□□□ 11.5
GAPVD1-204ENST00000394083 HERVK_113P62684 666 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 MRPS9P82933 396 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 LETM2Q2VYF4 491 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 ZNF772Q68DY9 489 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 BANK1Q8NDB2 785 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 LIMA1Q9UHB6 759 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 RPN1P04843 607 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 PRPHP41219 470 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 NLRP5P59047 1200 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 SPTY2D1Q68D10 685 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 ZSCAN29Q8IWY8 852 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 ZC3H12CQ9C0D7 883 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 LACRTQ9GZZ8 138 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 ZNF70Q9UC06 446 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 CTNND2Q9UQB3 1225 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 ZC3H4Q9UPT8 1303 aaKnown RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 STBD1O95210 358 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 ASTE1Q2TB18 679 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 CNNM4Q6P4Q7 775 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 EPM2AIP1Q7L775 607 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 FAM84AQ96KN4 292 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 EDN1P05305 212 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 CALM1P0DP23 149 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 CALM2P0DP24 149 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 CALM3P0DP25 149 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 PDE6BP35913 854 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 MAPK7Q13164 816 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 HGSNATQ68CP4 663 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 RSBN1LQ6PCB5 846 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 TMEM130Q8N3G9 435 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 TEKT1Q969V4 418 aa9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 ZNF215Q9UL58 517 aaPredicted RBP9.57□□□□□ -0.88
GAPVD1-204ENST00000394083 E9PMD0 336 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 TRAPPC10P48553 1259 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 CENPPQ6IPU0 288 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 TRIM22Q8IYM9 498 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 GMCL1P1Q8NEA9 526 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 TBC1D22AQ8WUA7 517 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 STRA6Q9BX79 667 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 GPR88Q9GZN0 384 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 PRR12Q9ULL5 1215 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 ZBTB5O15062 677 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 WNT7BP56706 349 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 ATP2B2Q01814 1243 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 TCP11X2Q5H9J9 407 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 MUM1L1Q5H9M0 696 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 SAMD7Q7Z3H4 446 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 CATSPER3Q86XQ3 398 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 KSR1Q8IVT5 923 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 CTCFLQ8NI51 663 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 CNKSR2Q8WXI2 1034 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 BAP1Q92560 729 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 FERMT2Q96AC1 680 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 TTC26A0AVF1 554 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 POTEB3A0JP26 581 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 POTECB2RU33 542 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 TISP43B9A030 160 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 TCP10L2B9ZVM9 353 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 CASP14P31944 242 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 CCT6AP40227 531 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 POTEBQ6S5H4 581 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 GSDMAQ96QA5 445 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 WDR87Q6ZQQ6 2873 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 CCDC196A0A1B0GTZ2 297 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 PARP1P09874 1014 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 AMPD2Q01433 879 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 LRRC41Q15345 812 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 PPP4R3AQ6IN85 833 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 PLEKHO2Q8TD55 490 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 C7orf25Q9BPX7 421 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 NENFQ9UMX5 172 aa9.56□□□□□ -0.88
GAPVD1-204ENST00000394083 NFIBO00712 420 aa9.55□□□□□ -0.88
GAPVD1-204ENST00000394083 MSH4O15457 936 aa9.55□□□□□ -0.88
GAPVD1-204ENST00000394083 SASH3O75995 380 aa9.55□□□□□ -0.88
GAPVD1-204ENST00000394083 SART3Q15020 963 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-204ENST00000394083 C1orf220Q5T0J3 134 aa9.55□□□□□ -0.88
GAPVD1-204ENST00000394083 ACRBPQ8NEB7 543 aa9.55□□□□□ -0.88
GAPVD1-204ENST00000394083 SCFD1Q8WVM8 642 aa9.55□□□□□ -0.88
GAPVD1-204ENST00000394083 GMCL1Q96IK5 515 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms