RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 SLC39A2Q9NP94 309 aa18.2■□□□□ 0.5
CNP-201ENST00000393888 ANAPC4Q9UJX5 808 aa18.2■□□□□ 0.5
CNP-201ENST00000393888 USP17L12C9JPN9 530 aa18.2■□□□□ 0.5
CNP-201ENST00000393888 USP17L21D6R901 530 aa18.2■□□□□ 0.5
CNP-201ENST00000393888 FTCDO95954 541 aa18.2■□□□□ 0.5
CNP-201ENST00000393888 CALM1P0DP23 149 aa18.2■□□□□ 0.5
CNP-201ENST00000393888 CALM2P0DP24 149 aa18.2■□□□□ 0.5
CNP-201ENST00000393888 CALM3P0DP25 149 aa18.2■□□□□ 0.5
CNP-201ENST00000393888 MAATS1Q7Z4T9 603 aa18.2■□□□□ 0.5
CNP-201ENST00000393888 TEX2Q8IWB9 1127 aa18.2■□□□□ 0.5
CNP-201ENST00000393888 ERGIC2Q96RQ1 377 aa18.2■□□□□ 0.5
CNP-201ENST00000393888 BACH1O14867 736 aa18.19■□□□□ 0.5
CNP-201ENST00000393888 PPP1R37O75864 691 aa18.19■□□□□ 0.5
CNP-201ENST00000393888 STARD3NLO95772 234 aa18.19■□□□□ 0.5
CNP-201ENST00000393888 CDK17Q00537 523 aa18.19■□□□□ 0.5
CNP-201ENST00000393888 ACTN3Q08043 901 aaPredicted RBP18.19■□□□□ 0.5
CNP-201ENST00000393888 MYCBPAPQ8TBZ2 947 aa18.19■□□□□ 0.5
CNP-201ENST00000393888 NOC3LQ8WTT2 800 aaKnown RBP18.19■□□□□ 0.5
CNP-201ENST00000393888 CASKIN2Q8WXE0 1202 aa18.19■□□□□ 0.5
CNP-201ENST00000393888 ZKSCAN4Q969J2 545 aaPredicted RBP18.19■□□□□ 0.5
CNP-201ENST00000393888 SEMA6BQ9H3T3 888 aa18.19■□□□□ 0.5
CNP-201ENST00000393888 PHLPP1O60346 1717 aa18.19■□□□□ 0.5
CNP-201ENST00000393888 PIGBQ92521 554 aa18.19■□□□□ 0.5
CNP-201ENST00000393888 AHDC1Q5TGY3 1603 aaPredicted RBP18.19■□□□□ 0.5
CNP-201ENST00000393888 CCDC194A0A1B0GVG4 234 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 A0A1W2PQJ5 194 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 DDAH1O94760 285 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 SSBP05455 408 aaKnown RBP eCLIP18.18■□□□□ 0.5
CNP-201ENST00000393888 GYG1P46976 350 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 CFAP221Q4G0U5 840 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 CEP85LQ5SZL2 805 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 EP400NLQ6ZTU2 488 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 OR2W6PQ8NHA6 318 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 RIOK1Q9BRS2 568 aaKnown RBP18.18■□□□□ 0.5
CNP-201ENST00000393888 GDF3Q9NR23 364 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 ZBTB1Q9Y2K1 713 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 FAM114A1Q8IWE2 563 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 ZSCAN29Q8IWY8 852 aaPredicted RBP18.18■□□□□ 0.5
CNP-201ENST00000393888 CCDC13Q8IYE1 715 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 STAG2Q8N3U4 1231 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 TRIM9Q9C026 710 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 KLC4Q9NSK0 619 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 SIK3Q9Y2K2 1263 aa18.18■□□□□ 0.5
CNP-201ENST00000393888 DUOX1Q9NRD9 1551 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 TNS2Q63HR2 1409 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 BICDL2A1A5D9 508 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 CCDC172P0C7W6 258 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 CYP2D6P10635 497 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 MDH1P40925 334 aaKnown RBP18.17■□□□□ 0.5
CNP-201ENST00000393888 ENOX2Q16206 610 aaKnown RBP18.17■□□□□ 0.5
CNP-201ENST00000393888 VWA3BQ502W6 1294 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 RUBCNQ92622 972 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 NDST4Q9H3R1 872 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 NLRC4Q9NPP4 1024 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 PLAAQ9Y263 795 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 NKX1-1Q15270 411 aaPredicted RBP18.17■□□□□ 0.5
CNP-201ENST00000393888 PTPROQ16827 1216 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 TXNRD1Q16881 649 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 CCDC40Q4G0X9 1142 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 TDRD12Q587J7 1177 aaKnown RBP18.17■□□□□ 0.5
CNP-201ENST00000393888 MICALCLQ6ZW33 695 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 CABP7Q86V35 215 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 KLHL7Q8IXQ5 586 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 KIAA0895Q8NCT3 520 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 ATP6V1G3Q96LB4 118 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 PRDM11Q9NQV5 511 aa18.17■□□□□ 0.5
CNP-201ENST00000393888 PALMO75781 387 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 TNFRSF8P28908 595 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 PSEN1P49768 467 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 PAK2Q13177 524 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 SPRED3Q2MJR0 410 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 NOX5Q96PH1 765 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 SUFUQ9UMX1 484 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 PCDHA4Q9UN74 947 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 ATP2C2O75185 946 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 ADAMTS2O95450 1211 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 IL2RBP14784 551 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 FIGNQ5HY92 759 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 VCPKMTQ9H867 229 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 PCDHA6Q9UN73 950 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 PCDHA8Q9Y5H6 950 aa18.16■□□□□ 0.5
CNP-201ENST00000393888 COL16A1Q07092 1604 aaPredicted RBP18.15■□□□□ 0.5
CNP-201ENST00000393888 A6NNZ2 444 aa18.15■□□□□ 0.5
CNP-201ENST00000393888 HNRNPH3P31942 346 aaKnown RBP18.15■□□□□ 0.5
CNP-201ENST00000393888 RDXP35241 583 aaKnown RBP18.15■□□□□ 0.5
CNP-201ENST00000393888 ITGB3BPQ13352 177 aaPredicted RBP18.15■□□□□ 0.5
CNP-201ENST00000393888 TUBB8Q3ZCM7 444 aa18.15■□□□□ 0.5
CNP-201ENST00000393888 BCCIPQ9P287 314 aaKnown RBP eCLIP18.15■□□□□ 0.5
CNP-201ENST00000393888 ATXN2Q99700 1313 aaKnown RBP18.15■□□□□ 0.5
CNP-201ENST00000393888 LCA5LO95447 670 aa18.15■□□□□ 0.5
CNP-201ENST00000393888 TMOD1P28289 359 aa18.15■□□□□ 0.5
CNP-201ENST00000393888 DDR1Q08345 913 aa18.15■□□□□ 0.5
CNP-201ENST00000393888 EHHADHQ08426 723 aa18.15■□□□□ 0.5
CNP-201ENST00000393888 CACNA2D4Q7Z3S7 1137 aa18.15■□□□□ 0.5
CNP-201ENST00000393888 FAM212AQ96EL1 285 aa18.15■□□□□ 0.5
CNP-201ENST00000393888 SLC40A1Q9NP59 571 aa18.15■□□□□ 0.5
CNP-201ENST00000393888 PAPPAQ13219 1627 aa18.15■□□□□ 0.5
CNP-201ENST00000393888 PDHBP11177 359 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 CALML3P27482 149 aa18.14■□□□□ 0.49
CNP-201ENST00000393888 HSPA1LP34931 641 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms