RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 CRYGNQ8WXF5 182 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 P2RX5Q93086 422 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 MBOAT7Q96N66 472 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 GMLQ99445 158 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 PSMD1Q99460 953 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 SRRTQ9BXP5 876 aaKnown RBP10.14□□□□□ -0.79
TDP1-202ENST00000393452 VPS16Q9H269 839 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 A0A1W2PQC6 194 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 MYMKA6NI61 221 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 SOWAHDA6NJG2 315 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 LGALS16A8MUM7 142 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 MEIS2O14770 477 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 NDUFB10O96000 172 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 FCER1AP12319 257 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 MMP14P50281 582 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 MCM6Q14566 821 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 RRP1BQ14684 758 aaKnown RBP10.13□□□□□ -0.79
TDP1-202ENST00000393452 HYIQ5T013 277 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 KRT79Q5XKE5 535 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 UNC13DQ70J99 1090 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 KIAA0895Q8NCT3 520 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 RAD54LQ92698 747 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 ERO1AQ96HE7 468 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 TRIM47Q96LD4 638 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 NUDT12Q9BQG2 462 aa10.13□□□□□ -0.79
TDP1-202ENST00000393452 HERC5Q9UII4 1024 aaKnown RBP10.13□□□□□ -0.79
TDP1-202ENST00000393452 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 USP17L15C9J2P7 530 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 USP17L13C9JLJ4 530 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 USP17L11C9JVI0 530 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 USP17L18D6R9N7 530 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 USP17L22D6RA61 530 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 USP17L17D6RBQ6 530 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 USP17L19D6RCP7 530 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 USP17L20D6RJB6 530 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 SLC26A4O43511 780 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 SLU7O95391 586 aaKnown RBP10.12□□□□□ -0.79
TDP1-202ENST00000393452 GH2P01242 217 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 VIL1P09327 827 aaKnown RBP10.12□□□□□ -0.79
TDP1-202ENST00000393452 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 EHHADHQ08426 723 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 USP17L24Q0WX57 530 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 AP3B2Q13367 1082 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 MTF1Q14872 753 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 RBM26Q5T8P6 1007 aaKnown RBP10.12□□□□□ -0.79
TDP1-202ENST00000393452 MCTP2Q6DN12 878 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 RSBN1LQ6PCB5 846 aaPredicted RBP10.12□□□□□ -0.79
TDP1-202ENST00000393452 USP17L6PQ6QN14 398 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 RAD9BQ6WBX8 426 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 RTKN2Q8IZC4 609 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 CSGALNACT2Q8N6G5 542 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 SNX29Q8TEQ0 813 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 CPLX3Q8WVH0 158 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 CSRNP1Q96S65 589 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 AMNQ9BXJ7 453 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 ANO3Q9BYT9 981 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 KCNMB3Q9NPA1 279 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 DNAI1Q9UI46 699 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 ADGRG1Q9Y653 693 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 SMCHD1A6NHR9 2005 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 RNF225M0QZC1 329 aaPredicted RBP10.12□□□□□ -0.79
TDP1-202ENST00000393452 TPM1P09493 284 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 CCDC175P0C221 793 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 UBXN1Q04323 297 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 NAA30Q147X3 362 aaPredicted RBP10.12□□□□□ -0.79
TDP1-202ENST00000393452 ANKRD40Q6AI12 368 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 CENPPQ6IPU0 288 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 KCNK18Q7Z418 384 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 TTLL6Q8N841 843 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 MB21D1Q8N884 522 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 CDK5RAP3Q96JB5 506 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 LRRC27Q9C0I9 530 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 ABHD10Q9NUJ1 306 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 PCDHA12Q9UN75 941 aa10.12□□□□□ -0.79
TDP1-202ENST00000393452 A0A1W2PRG0 241 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 BMP3P12645 472 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 ECM1Q16610 540 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 SYDE2Q5VT97 1194 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 FOXR2Q6PJQ5 311 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 TMTC1Q8IUR5 882 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 P2RX7Q99572 595 aaKnown RBP10.11□□□□□ -0.79
TDP1-202ENST00000393452 DESI2Q9BSY9 194 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 MRPL44Q9H9J2 332 aaKnown RBP10.11□□□□□ -0.79
TDP1-202ENST00000393452 COL4A5P29400 1685 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 KIF13BQ9NQT8 1826 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 RAD21O60216 631 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 KCNA3P22001 575 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 DNM2P50570 870 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 FAM114A1Q8IWE2 563 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 GUF1Q8N442 669 aaKnown RBP10.11□□□□□ -0.79
TDP1-202ENST00000393452 NUP88Q99567 741 aaPredicted RBP10.11□□□□□ -0.79
TDP1-202ENST00000393452 TUBGCP2Q9BSJ2 902 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 PDGFDQ9GZP0 370 aaPredicted RBP10.11□□□□□ -0.79
TDP1-202ENST00000393452 SEMA6BQ9H3T3 888 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 TMOD2Q9NZR1 351 aa10.11□□□□□ -0.79
TDP1-202ENST00000393452 KDM3AQ9Y4C1 1321 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 PSMD14O00487 310 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 FOSP01100 380 aaPredicted RBP10.1□□□□□ -0.79
TDP1-202ENST00000393452 ARHGAP4P98171 946 aa10.1□□□□□ -0.79
TDP1-202ENST00000393452 PSMD2Q13200 908 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms