RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CCDC97Q96F63 343 aaPredicted RBP21.51■■□□□ 1.03
SHANK1-203ENST00000391813 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.51■■□□□ 1.03
SHANK1-203ENST00000391813 GPR108Q9NPR9 543 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 ARHGAP42A6NI28 874 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 PPEF1O14829 653 aaPredicted RBP21.51■■□□□ 1.03
SHANK1-203ENST00000391813 PDCLQ13371 301 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 MUM1L1Q5H9M0 696 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 ZNF658Q5TYW1 1059 aaPredicted RBP21.51■■□□□ 1.03
SHANK1-203ENST00000391813 NBPF10Q6P3W6 841 aaKnown RBP21.51■■□□□ 1.03
SHANK1-203ENST00000391813 ANKRD35Q8N283 1001 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 AATFQ9NY61 560 aaKnown RBP eCLIP21.51■■□□□ 1.03
SHANK1-203ENST00000391813 PSD3Q9NYI0 1048 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 NCOA3Q9Y6Q9 1424 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 HOXA7P31268 230 aaPredicted RBP21.51■■□□□ 1.03
SHANK1-203ENST00000391813 MAN1A1P33908 653 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 ADCY8P40145 1251 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 APOA5Q6Q788 366 aa21.51■■□□□ 1.03
SHANK1-203ENST00000391813 FAF1Q9UNN5 650 aaPredicted RBP21.51■■□□□ 1.03
SHANK1-203ENST00000391813 ZC3H13Q5T200 1668 aaKnown RBP21.5■■□□□ 1.03
SHANK1-203ENST00000391813 PPFIA2O75334 1257 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 SMTNP53814 917 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 BIRC3Q13489 604 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 ZNF408Q9H9D4 720 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 ATG3Q9NT62 314 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 DLC1Q96QB1 1528 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 ZNF804BA4D1E1 1349 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 USP27XA6NNY8 438 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 ABCA6Q8N139 1617 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 ABCB4P21439 1286 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 DHX9Q08211 1270 aaKnown RBP21.5■■□□□ 1.03
SHANK1-203ENST00000391813 PGBD1Q96JS3 809 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 TSC22D3Q99576 134 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 KIF2CQ99661 725 aa21.5■■□□□ 1.03
SHANK1-203ENST00000391813 CHRNDQ07001 517 aa21.49■■□□□ 1.03
SHANK1-203ENST00000391813 RNF26Q9BY78 433 aaPredicted RBP21.49■■□□□ 1.03
SHANK1-203ENST00000391813 MRFAP1Q9Y605 127 aa21.49■■□□□ 1.03
SHANK1-203ENST00000391813 SSX2IPQ9Y2D8 614 aa21.49■■□□□ 1.03
SHANK1-203ENST00000391813 PDE8BO95263 885 aa21.49■■□□□ 1.03
SHANK1-203ENST00000391813 OR52Z1P0C646 297 aa21.49■■□□□ 1.03
SHANK1-203ENST00000391813 NOVA2Q9UNW9 492 aaKnown RBP21.49■■□□□ 1.03
SHANK1-203ENST00000391813 PPARAQ07869 468 aa21.49■■□□□ 1.03
SHANK1-203ENST00000391813 MAN2A1Q16706 1144 aa21.49■■□□□ 1.03
SHANK1-203ENST00000391813 PPP1R21Q6ZMI0 780 aa21.49■■□□□ 1.03
SHANK1-203ENST00000391813 NEK9Q8TD19 979 aa21.49■■□□□ 1.03
SHANK1-203ENST00000391813 USP40Q9NVE5 1235 aa21.49■■□□□ 1.03
SHANK1-203ENST00000391813 ARPP21Q9UBL0 812 aaPredicted RBP21.49■■□□□ 1.03
SHANK1-203ENST00000391813 IVNS1ABPQ9Y6Y0 642 aa21.49■■□□□ 1.03
SHANK1-203ENST00000391813 PABPN1LA6NDY0 278 aaKnown RBP21.48■■□□□ 1.03
SHANK1-203ENST00000391813 LAD1O00515 517 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 SCG2P13521 617 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 CCDC93Q567U6 631 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 KCNF1Q9H3M0 494 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 CSADQ9Y600 493 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 IFNL3Q8IZI9 196 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 P2RX5Q93086 422 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 SUDS3Q9H7L9 328 aaPredicted RBP21.48■■□□□ 1.03
SHANK1-203ENST00000391813 TBC1D7Q9P0N9 293 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 ATP8A1Q9Y2Q0 1164 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 AXIN2Q9Y2T1 843 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 C10orf76Q5T2E6 689 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 NLRP10Q86W26 655 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 MRPL44Q9H9J2 332 aaKnown RBP21.48■■□□□ 1.03
SHANK1-203ENST00000391813 hCG_1642624A0A1W2PR95 340 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 GCNT3O95395 438 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 THAP9Q9H5L6 903 aa21.48■■□□□ 1.03
SHANK1-203ENST00000391813 NHEJ1Q9H9Q4 299 aaPredicted RBP21.48■■□□□ 1.03
SHANK1-203ENST00000391813 NPR1P16066 1061 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 ZNF589Q86UQ0 364 aaPredicted RBP21.47■■□□□ 1.03
SHANK1-203ENST00000391813 ARHGEF35A5YM69 484 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 GGCXP38435 758 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 UHMK1Q8TAS1 419 aaKnown RBP21.47■■□□□ 1.03
SHANK1-203ENST00000391813 MAGOHBQ96A72 148 aaKnown RBP21.47■■□□□ 1.03
SHANK1-203ENST00000391813 VIPAS39Q9H9C1 493 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 SRPRBQ9Y5M8 271 aaKnown RBP21.47■■□□□ 1.03
SHANK1-203ENST00000391813 ARL1P40616 181 aaPredicted RBP21.47■■□□□ 1.03
SHANK1-203ENST00000391813 FAM26FQ5R3K3 315 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 DCUN1D2Q6PH85 259 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 GSDMBQ8TAX9 411 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 FMNL1O95466 1100 aaPredicted RBP21.47■■□□□ 1.03
SHANK1-203ENST00000391813 ATF2P15336 505 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 MIER3Q7Z3K6 550 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 CCDC89Q8N998 374 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 PI4K2BQ8TCG2 481 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 AS3MTQ9HBK9 375 aa21.47■■□□□ 1.03
SHANK1-203ENST00000391813 CCDC188H7C350 402 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 PCP11498 1178 aaKnown RBP21.46■■□□□ 1.03
SHANK1-203ENST00000391813 FAM133BQ5BKY9 247 aaKnown RBP21.46■■□□□ 1.03
SHANK1-203ENST00000391813 TOGARAM2Q6ZUX3 1019 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 GREM2Q9H772 168 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 DBNLQ9UJU6 430 aaKnown RBP21.46■■□□□ 1.03
SHANK1-203ENST00000391813 PSMD6Q15008 389 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 UBE3CQ15386 1083 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 ARHGAP44Q17R89 818 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 PROSER3Q2NL68 480 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 BRDTQ58F21 947 aaPredicted RBP21.46■■□□□ 1.03
SHANK1-203ENST00000391813 PALM2Q8IXS6 379 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 VTI1AQ96AJ9 217 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 ZSCAN10Q96SZ4 725 aaPredicted RBP21.46■■□□□ 1.03
SHANK1-203ENST00000391813 NARFQ9UHQ1 456 aa21.46■■□□□ 1.03
SHANK1-203ENST00000391813 E9PCH4 1651 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms