RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 DMP1Q13316 513 aaPredicted RBP16.04■□□□□ 0.16
PSME4-201ENST00000389993 KMT5BQ4FZB7 885 aa16.04■□□□□ 0.16
PSME4-201ENST00000389993 CACTINQ8WUQ7 758 aaKnown RBP16.04■□□□□ 0.16
PSME4-201ENST00000389993 USP31Q70CQ4 1352 aa16.04■□□□□ 0.16
PSME4-201ENST00000389993 E7EVH7 732 aa16.04■□□□□ 0.16
PSME4-201ENST00000389993 UBE2Q2LH0YL09 131 aa16.04■□□□□ 0.16
PSME4-201ENST00000389993 MRPS9P82933 396 aaKnown RBP16.04■□□□□ 0.16
PSME4-201ENST00000389993 MXRA7P84157 204 aa16.04■□□□□ 0.16
PSME4-201ENST00000389993 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
PSME4-201ENST00000389993 SPTLC3Q9NUV7 552 aa16.04■□□□□ 0.16
PSME4-201ENST00000389993 YARSP54577 528 aaKnown RBP16.04■□□□□ 0.16
PSME4-201ENST00000389993 TTC19Q6DKK2 380 aaPredicted RBP16.04■□□□□ 0.16
PSME4-201ENST00000389993 MAGED2Q9UNF1 606 aaPredicted RBP16.04■□□□□ 0.16
PSME4-201ENST00000389993 BCRP11274 1271 aa16.04■□□□□ 0.16
PSME4-201ENST00000389993 DPH5Q9H2P9 285 aa16.04■□□□□ 0.16
PSME4-201ENST00000389993 MTUS1Q9ULD2 1270 aa16.04■□□□□ 0.16
PSME4-201ENST00000389993 CALCOCO2Q13137 446 aa16.04■□□□□ 0.16
PSME4-201ENST00000389993 APBB1IPQ7Z5R6 666 aaPredicted RBP16.04■□□□□ 0.16
PSME4-201ENST00000389993 SSTR3P32745 418 aaPredicted RBP16.03■□□□□ 0.16
PSME4-201ENST00000389993 CCDC105Q8IYK2 499 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 OR8K1Q8NGG5 319 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 ERO1AQ96HE7 468 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 MED10Q9BTT4 135 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 LONRF2Q1L5Z9 754 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 MB21D2Q8IYB1 491 aaPredicted RBP16.03■□□□□ 0.16
PSME4-201ENST00000389993 BBXQ8WY36 941 aaPredicted RBP16.03■□□□□ 0.16
PSME4-201ENST00000389993 HPS3Q969F9 1004 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 PTPN22Q9Y2R2 807 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 OVOS2A0A0J9YW53 1432 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 OVOS2Q6IE36 1432 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 SRGAP2CP0DJJ0 459 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 BCL2L12Q9HB09 334 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 HNRNPDLO14979 420 aaKnown RBP16.03■□□□□ 0.16
PSME4-201ENST00000389993 PIK3CAP42336 1068 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 RPS6KA1Q15418 735 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 TSNARE1Q96NA8 513 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 ZHX2Q9Y6X8 837 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 VWA3BQ502W6 1294 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 GPATCH4Q5T3I0 446 aaKnown RBP16.03■□□□□ 0.16
PSME4-201ENST00000389993 CEP170P1Q96L14 293 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 TTC14Q96N46 770 aa16.03■□□□□ 0.16
PSME4-201ENST00000389993 AKR1B1P15121 316 aa16.02■□□□□ 0.16
PSME4-201ENST00000389993 RBM6P78332 1123 aaKnown RBP16.02■□□□□ 0.16
PSME4-201ENST00000389993 LIN9Q5TKA1 542 aa16.02■□□□□ 0.16
PSME4-201ENST00000389993 FAM133AQ8N9E0 248 aa16.02■□□□□ 0.16
PSME4-201ENST00000389993 RCOR1Q9UKL0 485 aa16.02■□□□□ 0.16
PSME4-201ENST00000389993 UTP11Q9Y3A2 253 aaKnown RBP16.02■□□□□ 0.16
PSME4-201ENST00000389993 CAMTA2O94983 1202 aa16.02■□□□□ 0.16
PSME4-201ENST00000389993 TMOD1P28289 359 aa16.02■□□□□ 0.16
PSME4-201ENST00000389993 SPATA31A1Q5TZJ5 1347 aa16.02■□□□□ 0.16
PSME4-201ENST00000389993 SND1Q7KZF4 910 aaKnown RBP eCLIP16.02■□□□□ 0.16
PSME4-201ENST00000389993 MCF2L2Q86YR7 1114 aa16.02■□□□□ 0.16
PSME4-201ENST00000389993 PPP1R13BQ96KQ4 1090 aa16.02■□□□□ 0.16
PSME4-201ENST00000389993 PIM2Q9P1W9 311 aa16.02■□□□□ 0.16
PSME4-201ENST00000389993 R3HDM1Q15032 1099 aaKnown RBP16.02■□□□□ 0.15
PSME4-201ENST00000389993 TMTC3Q6ZXV5 915 aa16.02■□□□□ 0.15
PSME4-201ENST00000389993 WRNIP1Q96S55 665 aa16.02■□□□□ 0.15
PSME4-201ENST00000389993 MED14O60244 1454 aa16.02■□□□□ 0.15
PSME4-201ENST00000389993 STAT1P42224 750 aa16.02■□□□□ 0.15
PSME4-201ENST00000389993 SCARA5Q6ZMJ2 495 aa16.02■□□□□ 0.15
PSME4-201ENST00000389993 OPA1O60313 960 aa16.02■□□□□ 0.15
PSME4-201ENST00000389993 ATF7P17544 494 aaPredicted RBP16.02■□□□□ 0.15
PSME4-201ENST00000389993 HDXQ7Z353 690 aa16.02■□□□□ 0.15
PSME4-201ENST00000389993 ZNF215Q9UL58 517 aaPredicted RBP16.02■□□□□ 0.15
PSME4-201ENST00000389993 INO80B-WBP1J3KQ70 363 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 INO80BQ9C086 356 aaPredicted RBP16.01■□□□□ 0.15
PSME4-201ENST00000389993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.01■□□□□ 0.15
PSME4-201ENST00000389993 SEC31AO94979 1220 aaKnown RBP16.01■□□□□ 0.15
PSME4-201ENST00000389993 PPP1R2P41236 205 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 CDAN1Q8IWY9 1227 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 ITSN1Q15811 1721 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 IFNB1P01574 187 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 PLA2G4BP0C869 781 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 EHHADHQ08426 723 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 CCDC17Q96LX7 622 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 NPHP3-ACAD11A0A0J9YXS1 232 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 BRDTQ58F21 947 aaPredicted RBP16.01■□□□□ 0.15
PSME4-201ENST00000389993 CASC4Q6P4E1 433 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 UBL4BQ8N7F7 174 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 MROH7-TTC4A0A0A0MT08 1334 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 E9PMD0 336 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 VIMP08670 466 aaKnown RBP16.01■□□□□ 0.15
PSME4-201ENST00000389993 CCDC26Q8TAB7 109 aa16.01■□□□□ 0.15
PSME4-201ENST00000389993 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.01■□□□□ 0.15
PSME4-201ENST00000389993 CYP27A1Q02318 531 aa16■□□□□ 0.15
PSME4-201ENST00000389993 GBP6Q6ZN66 633 aa16■□□□□ 0.15
PSME4-201ENST00000389993 CPLX4Q7Z7G2 160 aa16■□□□□ 0.15
PSME4-201ENST00000389993 ADGRF4Q8IZF3 695 aa16■□□□□ 0.15
PSME4-201ENST00000389993 BHMT2Q9H2M3 363 aa16■□□□□ 0.15
PSME4-201ENST00000389993 COL4A3BPQ9Y5P4 624 aa16■□□□□ 0.15
PSME4-201ENST00000389993 PNMA6FA0A0J9YX94 578 aa16■□□□□ 0.15
PSME4-201ENST00000389993 GFPT2O94808 682 aa16■□□□□ 0.15
PSME4-201ENST00000389993 MYL7Q01449 175 aa16■□□□□ 0.15
PSME4-201ENST00000389993 PRR5LQ6MZQ0 368 aa16■□□□□ 0.15
PSME4-201ENST00000389993 DISC1Q9NRI5 854 aa16■□□□□ 0.15
PSME4-201ENST00000389993 SRPRBQ9Y5M8 271 aaKnown RBP16■□□□□ 0.15
PSME4-201ENST00000389993 EXOC3L4Q17RC7 722 aa16■□□□□ 0.15
PSME4-201ENST00000389993 ZNF365Q70YC5 407 aa16■□□□□ 0.15
PSME4-201ENST00000389993 SLC35F6Q8N357 371 aa16■□□□□ 0.15
PSME4-201ENST00000389993 MSANTD4Q8NCY6 345 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms