RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 NDUFB10O96000 172 aa19.26■□□□□ 0.67
PDX1-201ENST00000381033 PBX1P40424 430 aa19.26■□□□□ 0.67
PDX1-201ENST00000381033 FKBP1AP62942 108 aaKnown RBP19.26■□□□□ 0.67
PDX1-201ENST00000381033 KIAA1755Q5JYT7 1200 aa19.26■□□□□ 0.67
PDX1-201ENST00000381033 MKL1Q969V6 931 aa19.26■□□□□ 0.67
PDX1-201ENST00000381033 FXR1P51114 621 aaKnown RBP eCLIP19.26■□□□□ 0.67
PDX1-201ENST00000381033 ASIC1P78348 528 aa19.26■□□□□ 0.67
PDX1-201ENST00000381033 IKQ13123 557 aaPredicted RBP19.26■□□□□ 0.67
PDX1-201ENST00000381033 REXO1L1PQ8IX06 675 aa19.26■□□□□ 0.67
PDX1-201ENST00000381033 CCDC112Q8NEF3 446 aa19.26■□□□□ 0.67
PDX1-201ENST00000381033 AK8Q96MA6 479 aa19.26■□□□□ 0.67
PDX1-201ENST00000381033 KCND1Q9NSA2 647 aa19.26■□□□□ 0.67
PDX1-201ENST00000381033 RMND1Q9NWS8 449 aa19.26■□□□□ 0.67
PDX1-201ENST00000381033 NYAP2Q9P242 653 aa19.26■□□□□ 0.67
PDX1-201ENST00000381033 SOWAHDA6NJG2 315 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 KCNJ18B7U540 433 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 N4BP3O15049 544 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 CASP14P31944 242 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 PDE4DQ08499 809 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 KCNJ12Q14500 433 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 TCP11X2Q5H9J9 407 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 LARGE2Q8N3Y3 721 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 TTLL6Q8N841 843 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 DDX25Q9UHL0 483 aaKnown RBP19.25■□□□□ 0.67
PDX1-201ENST00000381033 SHTN1A0MZ66 631 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 TTC36A6NLP5 189 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 hCG_1984214I3L0E3 225 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 RHOBTB3O94955 611 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 MIGA2Q7L4E1 593 aa19.25■□□□□ 0.67
PDX1-201ENST00000381033 CCDC84Q86UT8 332 aaPredicted RBP19.25■□□□□ 0.67
PDX1-201ENST00000381033 ZNF713Q8N859 430 aaPredicted RBP19.25■□□□□ 0.67
PDX1-201ENST00000381033 GIMAP8Q8ND71 665 aaPredicted RBP19.25■□□□□ 0.67
PDX1-201ENST00000381033 PSDA5PKW4 1024 aaPredicted RBP19.24■□□□□ 0.67
PDX1-201ENST00000381033 GYPCP04921 128 aa19.24■□□□□ 0.67
PDX1-201ENST00000381033 CT47A1Q5JQC4 288 aaPredicted RBP19.24■□□□□ 0.67
PDX1-201ENST00000381033 TMEM179Q6ZVK1 233 aa19.24■□□□□ 0.67
PDX1-201ENST00000381033 LRRN4CLQ8ND94 238 aa19.24■□□□□ 0.67
PDX1-201ENST00000381033 GLIS3Q8NEA6 775 aa19.24■□□□□ 0.67
PDX1-201ENST00000381033 ACER1Q8TDN7 264 aa19.24■□□□□ 0.67
PDX1-201ENST00000381033 SRRTQ9BXP5 876 aaKnown RBP19.24■□□□□ 0.67
PDX1-201ENST00000381033 SLC39A2Q9NP94 309 aa19.24■□□□□ 0.67
PDX1-201ENST00000381033 PAXBP1Q9Y5B6 917 aa19.24■□□□□ 0.67
PDX1-201ENST00000381033 MYMKA6NI61 221 aa19.24■□□□□ 0.67
PDX1-201ENST00000381033 COPB1P53618 953 aaKnown RBP19.24■□□□□ 0.67
PDX1-201ENST00000381033 SPDYE2BA6NHP3 402 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 MEIS2O14770 477 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 CTIFO43310 598 aaKnown RBP19.23■□□□□ 0.67
PDX1-201ENST00000381033 SPDYE6P0CI01 402 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 ERCC3P19447 782 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 MRPL12P52815 198 aaKnown RBP19.23■□□□□ 0.67
PDX1-201ENST00000381033 SNX29Q8TEQ0 813 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 VEZTQ9HBM0 779 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 ATF5Q9Y2D1 282 aaPredicted RBP19.23■□□□□ 0.67
PDX1-201ENST00000381033 PPP2R2CQ9Y2T4 447 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 NRDCO43847 1150 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 KCNB1Q14721 858 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 ZYXQ15942 572 aaKnown RBP19.23■□□□□ 0.67
PDX1-201ENST00000381033 RSBN1LQ6PCB5 846 aaPredicted RBP19.23■□□□□ 0.67
PDX1-201ENST00000381033 TRIM65Q6PJ69 517 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 KIAA0895Q8NCT3 520 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 CALML4Q96GE6 196 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 TMEM39BQ9GZU3 492 aa19.23■□□□□ 0.67
PDX1-201ENST00000381033 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.23■□□□□ 0.67
PDX1-201ENST00000381033 ZNF215Q9UL58 517 aaPredicted RBP19.23■□□□□ 0.67
PDX1-201ENST00000381033 AKR1B15C9JRZ8 316 aaPredicted RBP19.22■□□□□ 0.67
PDX1-201ENST00000381033 PES1O00541 588 aaKnown RBP19.22■□□□□ 0.67
PDX1-201ENST00000381033 HOXA13P31271 388 aaPredicted RBP19.22■□□□□ 0.67
PDX1-201ENST00000381033 RBM26Q5T8P6 1007 aaKnown RBP19.22■□□□□ 0.67
PDX1-201ENST00000381033 SLC30A10Q6XR72 485 aa19.22■□□□□ 0.67
PDX1-201ENST00000381033 TRIM47Q96LD4 638 aa19.22■□□□□ 0.67
PDX1-201ENST00000381033 DUSP9Q99956 384 aaKnown RBP19.22■□□□□ 0.67
PDX1-201ENST00000381033 IRX2Q9BZI1 471 aaPredicted RBP19.22■□□□□ 0.67
PDX1-201ENST00000381033 LIMA1Q9UHB6 759 aaKnown RBP19.22■□□□□ 0.67
PDX1-201ENST00000381033 DNAI1Q9UI46 699 aa19.22■□□□□ 0.67
PDX1-201ENST00000381033 LRRC10BA6NIK2 292 aa19.22■□□□□ 0.67
PDX1-201ENST00000381033 ARHGAP6O43182 974 aa19.22■□□□□ 0.67
PDX1-201ENST00000381033 STAT3P40763 770 aa19.22■□□□□ 0.67
PDX1-201ENST00000381033 FXR2P51116 673 aaKnown RBP eCLIP19.22■□□□□ 0.67
PDX1-201ENST00000381033 ANKRD40Q6AI12 368 aa19.22■□□□□ 0.67
PDX1-201ENST00000381033 TTI2Q6NXR4 508 aa19.22■□□□□ 0.67
PDX1-201ENST00000381033 RAD9BQ6WBX8 426 aa19.22■□□□□ 0.67
PDX1-201ENST00000381033 KIF18AQ8NI77 898 aa19.22■□□□□ 0.67
PDX1-201ENST00000381033 DCAF4Q8WV16 495 aa19.21■□□□□ 0.67
PDX1-201ENST00000381033 C7orf25Q9BPX7 421 aa19.21■□□□□ 0.67
PDX1-201ENST00000381033 ZNF70Q9UC06 446 aaPredicted RBP19.21■□□□□ 0.67
PDX1-201ENST00000381033 ENTPD3O75355 529 aa19.21■□□□□ 0.67
PDX1-201ENST00000381033 KCNJ6P48051 423 aa19.21■□□□□ 0.67
PDX1-201ENST00000381033 SATB1Q01826 763 aa19.21■□□□□ 0.67
PDX1-201ENST00000381033 NCBP1Q09161 790 aaKnown RBP19.21■□□□□ 0.67
PDX1-201ENST00000381033 FILIP1LQ4L180 1135 aa19.21■□□□□ 0.67
PDX1-201ENST00000381033 PPP4R3AQ6IN85 833 aa19.21■□□□□ 0.67
PDX1-201ENST00000381033 LARP4BQ92615 738 aaKnown RBP19.21■□□□□ 0.67
PDX1-201ENST00000381033 CTAGE1Q96RT6 745 aa19.21■□□□□ 0.67
PDX1-201ENST00000381033 EXOC1Q9NV70 894 aa19.21■□□□□ 0.67
PDX1-201ENST00000381033 ATRNL1Q5VV63 1379 aa19.21■□□□□ 0.67
PDX1-201ENST00000381033 MARCH6O60337 910 aa19.2■□□□□ 0.66
PDX1-201ENST00000381033 STX10O60499 249 aa19.2■□□□□ 0.66
PDX1-201ENST00000381033 UBXN1Q04323 297 aa19.2■□□□□ 0.66
PDX1-201ENST00000381033 CCDC93Q567U6 631 aa19.2■□□□□ 0.66
PDX1-201ENST00000381033 PPP1R18Q6NYC8 613 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms