RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 CHD7Q9P2D1 2997 aa19.71■□□□□ 0.75
SMN2-201ENST00000380741 KIAA1217Q5T5P2 1943 aa19.71■□□□□ 0.75
SMN2-201ENST00000380741 FGBP02675 491 aa19.71■□□□□ 0.75
SMN2-201ENST00000380741 TBC1D5Q92609 795 aa19.71■□□□□ 0.75
SMN2-201ENST00000380741 KRT23Q9C075 422 aa19.71■□□□□ 0.75
SMN2-201ENST00000380741 GPHNQ9NQX3 736 aaPredicted RBP19.71■□□□□ 0.75
SMN2-201ENST00000380741 CTNNA3Q9UI47 895 aa19.71■□□□□ 0.75
SMN2-201ENST00000380741 SCN5AQ14524 2016 aa19.71■□□□□ 0.75
SMN2-201ENST00000380741 ABCB11O95342 1321 aa19.71■□□□□ 0.75
SMN2-201ENST00000380741 RAD50Q92878 1312 aa19.71■□□□□ 0.75
SMN2-201ENST00000380741 A6NJR5 290 aa19.7■□□□□ 0.74
SMN2-201ENST00000380741 B4DLN1 442 aa19.7■□□□□ 0.74
SMN2-201ENST00000380741 ARIH2O95376 493 aa19.7■□□□□ 0.74
SMN2-201ENST00000380741 PARP1P09874 1014 aaKnown RBP19.7■□□□□ 0.74
SMN2-201ENST00000380741 TXNP10599 105 aaKnown RBP19.7■□□□□ 0.74
SMN2-201ENST00000380741 CYP2C9P11712 490 aa19.7■□□□□ 0.74
SMN2-201ENST00000380741 MRPL12P52815 198 aaKnown RBP19.7■□□□□ 0.74
SMN2-201ENST00000380741 QRICH1Q2TAL8 776 aa19.7■□□□□ 0.74
SMN2-201ENST00000380741 BRDTQ58F21 947 aaPredicted RBP19.7■□□□□ 0.74
SMN2-201ENST00000380741 OTOP2Q7RTS6 562 aa19.7■□□□□ 0.74
SMN2-201ENST00000380741 SYTL5Q8TDW5 730 aaPredicted RBP19.7■□□□□ 0.74
SMN2-201ENST00000380741 SCLYQ96I15 445 aa19.7■□□□□ 0.74
SMN2-201ENST00000380741 MTIF3Q9H2K0 278 aaKnown RBP19.7■□□□□ 0.74
SMN2-201ENST00000380741 COL20A1Q9P218 1284 aa19.7■□□□□ 0.74
SMN2-201ENST00000380741 DHX16O60231 1041 aaKnown RBP19.69■□□□□ 0.74
SMN2-201ENST00000380741 SUPT20HL2P0C7V6 817 aa19.69■□□□□ 0.74
SMN2-201ENST00000380741 GSPT1P15170 499 aaKnown RBP19.69■□□□□ 0.74
SMN2-201ENST00000380741 PDE4AP27815 886 aa19.69■□□□□ 0.74
SMN2-201ENST00000380741 TTLL4Q14679 1199 aa19.69■□□□□ 0.74
SMN2-201ENST00000380741 NBPF20Q3BBV1 942 aa19.69■□□□□ 0.74
SMN2-201ENST00000380741 PPP1R13LQ8WUF5 828 aa19.69■□□□□ 0.74
SMN2-201ENST00000380741 VWCEQ96DN2 955 aa19.69■□□□□ 0.74
SMN2-201ENST00000380741 TAAR1Q96RJ0 339 aa19.69■□□□□ 0.74
SMN2-201ENST00000380741 UBAC1Q9BSL1 405 aa19.69■□□□□ 0.74
SMN2-201ENST00000380741 CNNM2Q9H8M5 875 aa19.69■□□□□ 0.74
SMN2-201ENST00000380741 JMJD4Q9H9V9 463 aa19.69■□□□□ 0.74
SMN2-201ENST00000380741 RAB30Q15771 203 aa19.68■□□□□ 0.74
SMN2-201ENST00000380741 FAM47CQ5HY64 1035 aa19.68■□□□□ 0.74
SMN2-201ENST00000380741 RPUSD2Q8IZ73 545 aaKnown RBP19.68■□□□□ 0.74
SMN2-201ENST00000380741 MAF1Q9H063 256 aa19.68■□□□□ 0.74
SMN2-201ENST00000380741 VAT1LQ9HCJ6 419 aa19.68■□□□□ 0.74
SMN2-201ENST00000380741 TANC1Q9C0D5 1861 aa19.68■□□□□ 0.74
SMN2-201ENST00000380741 KPNA6O60684 536 aa19.67■□□□□ 0.74
SMN2-201ENST00000380741 IFIT1BQ5T764 474 aaKnown RBP19.67■□□□□ 0.74
SMN2-201ENST00000380741 TTC22Q5TAA0 569 aa19.67■□□□□ 0.74
SMN2-201ENST00000380741 NFRKBQ6P4R8 1299 aa19.67■□□□□ 0.74
SMN2-201ENST00000380741 CCDC62Q6P9F0 684 aa19.67■□□□□ 0.74
SMN2-201ENST00000380741 SEPT14Q6ZU15 432 aa19.67■□□□□ 0.74
SMN2-201ENST00000380741 FBXO11Q86XK2 927 aa19.67■□□□□ 0.74
SMN2-201ENST00000380741 MCF2L2Q86YR7 1114 aa19.67■□□□□ 0.74
SMN2-201ENST00000380741 STAG2Q8N3U4 1231 aa19.67■□□□□ 0.74
SMN2-201ENST00000380741 USP38Q8NB14 1042 aa19.67■□□□□ 0.74
SMN2-201ENST00000380741 NSUN6Q8TEA1 469 aaKnown RBP19.67■□□□□ 0.74
SMN2-201ENST00000380741 RMDN3Q96TC7 470 aa19.67■□□□□ 0.74
SMN2-201ENST00000380741 MSRAQ9UJ68 235 aa19.67■□□□□ 0.74
SMN2-201ENST00000380741 MRPL11Q9Y3B7 192 aaKnown RBP19.67■□□□□ 0.74
SMN2-201ENST00000380741 MUC3AQ02505 3323 aa19.66■□□□□ 0.74
SMN2-201ENST00000380741 SEC23AQ15436 765 aa19.66■□□□□ 0.74
SMN2-201ENST00000380741 CYB5R4Q7L1T6 521 aa19.66■□□□□ 0.74
SMN2-201ENST00000380741 NKX2-4Q9H2Z4 354 aa19.66■□□□□ 0.74
SMN2-201ENST00000380741 PRDM12Q9H4Q4 367 aa19.66■□□□□ 0.74
SMN2-201ENST00000380741 YBX2Q9Y2T7 364 aaKnown RBP19.66■□□□□ 0.74
SMN2-201ENST00000380741 ARHGAP1Q07960 439 aa19.65■□□□□ 0.74
SMN2-201ENST00000380741 STXBP2Q15833 593 aa19.65■□□□□ 0.74
SMN2-201ENST00000380741 LY6KQ17RY6 165 aa19.65■□□□□ 0.74
SMN2-201ENST00000380741 AFG1LQ8WV93 481 aa19.65■□□□□ 0.74
SMN2-201ENST00000380741 IWS1Q96ST2 819 aa19.65■□□□□ 0.74
SMN2-201ENST00000380741 GAS2L1Q99501 681 aaPredicted RBP19.65■□□□□ 0.74
SMN2-201ENST00000380741 SUPT16HQ9Y5B9 1047 aaKnown RBP19.65■□□□□ 0.74
SMN2-201ENST00000380741 SLC4A7Q9Y6M7 1214 aa19.65■□□□□ 0.74
SMN2-201ENST00000380741 TRIP12Q14669 1992 aaPredicted RBP19.64■□□□□ 0.74
SMN2-201ENST00000380741 ZBBXA8MT70 800 aa19.64■□□□□ 0.73
SMN2-201ENST00000380741 OPLAHO14841 1288 aa19.64■□□□□ 0.73
SMN2-201ENST00000380741 PFKMP08237 780 aa19.64■□□□□ 0.73
SMN2-201ENST00000380741 MMP3P08254 477 aa19.64■□□□□ 0.73
SMN2-201ENST00000380741 EIF2AK2P19525 551 aaKnown RBP19.64■□□□□ 0.73
SMN2-201ENST00000380741 RABGGTBP53611 331 aa19.64■□□□□ 0.73
SMN2-201ENST00000380741 PTPN11Q06124 597 aaPredicted RBP19.64■□□□□ 0.73
SMN2-201ENST00000380741 ARHGEF16Q5VV41 709 aa19.64■□□□□ 0.73
SMN2-201ENST00000380741 DEFB128Q7Z7B8 93 aa19.64■□□□□ 0.73
SMN2-201ENST00000380741 AMNQ9BXJ7 453 aa19.64■□□□□ 0.73
SMN2-201ENST00000380741 MAD2L2Q9UI95 211 aa19.64■□□□□ 0.73
SMN2-201ENST00000380741 MYH7BA7E2Y1 1941 aa19.64■□□□□ 0.73
SMN2-201ENST00000380741 TTC28Q96AY4 2481 aa19.63■□□□□ 0.73
SMN2-201ENST00000380741 BAZ2BQ9UIF8 2168 aaKnown RBP19.63■□□□□ 0.73
SMN2-201ENST00000380741 TET1Q8NFU7 2136 aa19.63■□□□□ 0.73
SMN2-201ENST00000380741 KLRF2D3W0D1 207 aa19.63■□□□□ 0.73
SMN2-201ENST00000380741 PPP1R11O60927 126 aaPredicted RBP19.63■□□□□ 0.73
SMN2-201ENST00000380741 CFBP00751 764 aa19.63■□□□□ 0.73
SMN2-201ENST00000380741 GH1P01241 217 aa19.63■□□□□ 0.73
SMN2-201ENST00000380741 CHMP4BP1P59074 171 aa19.63■□□□□ 0.73
SMN2-201ENST00000380741 CHST3Q7LGC8 479 aa19.63■□□□□ 0.73
SMN2-201ENST00000380741 MTMR8Q96EF0 704 aa19.63■□□□□ 0.73
SMN2-201ENST00000380741 SLC28A3Q9HAS3 691 aa19.63■□□□□ 0.73
SMN2-201ENST00000380741 PXMP2Q9NR77 195 aa19.63■□□□□ 0.73
SMN2-201ENST00000380741 REV3LO60673 3130 aa19.62■□□□□ 0.73
SMN2-201ENST00000380741 PALM3A6NDB9 673 aaPredicted RBP19.62■□□□□ 0.73
SMN2-201ENST00000380741 PITPNM1O00562 1244 aa19.62■□□□□ 0.73
SMN2-201ENST00000380741 CYP21A2P08686 494 aa19.62■□□□□ 0.73
SMN2-201ENST00000380741 HSD17B4P51659 736 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms