RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ZBTB33Q86T24 672 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 TRIML1Q8N9V2 468 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 CCDC94Q9BW85 323 aaPredicted RBP14.91□□□□□ -0.02
GPC6-201ENST00000377047 CARMIL3Q8ND23 1372 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 NSFP46459 744 aaKnown RBP14.91□□□□□ -0.02
GPC6-201ENST00000377047 MFAP3P55082 362 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 EEF2KMTQ96G04 330 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 PNMA3Q9UL41 463 aa14.91□□□□□ -0.02
GPC6-201ENST00000377047 PTPREP23469 700 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 DENND2CQ68D51 928 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 FAM160B2Q86V87 743 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 A6NJR5 290 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 MARK3P27448 753 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 PLCB4Q15147 1175 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 CEP85LQ5SZL2 805 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 GKAP1Q5VSY0 366 aaPredicted RBP14.9□□□□□ -0.02
GPC6-201ENST00000377047 CLEC4GQ6UXB4 293 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 TAB3Q8N5C8 712 aaPredicted RBP14.9□□□□□ -0.02
GPC6-201ENST00000377047 FBXO18Q8NFZ0 1043 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 TTLL11Q8NHH1 800 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 OSBP2Q969R2 916 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 NACC1Q96RE7 527 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 MAGEF1Q9HAY2 307 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 RNF8O76064 485 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 GAP43P17677 238 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 VPS41P49754 854 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 PTK2Q05397 1052 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 EXOC8Q8IYI6 725 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 ATP2A3Q93084 1043 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 NT5C1BQ96P26 610 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 PCIF1Q9H4Z3 704 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 THAP12O43422 761 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 HOXA13P31271 388 aaPredicted RBP14.9□□□□□ -0.02
GPC6-201ENST00000377047 ADCY8P40145 1251 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 CRKP46108 304 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 RSRC2Q7L4I2 434 aaKnown RBP14.9□□□□□ -0.02
GPC6-201ENST00000377047 SDCCAG8Q86SQ7 713 aaPredicted RBP14.9□□□□□ -0.02
GPC6-201ENST00000377047 RGS12O14924 1447 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 GCFC2P16383 781 aaKnown RBP14.9□□□□□ -0.02
GPC6-201ENST00000377047 RUFY4Q6ZNE9 571 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 EPSTI1Q96J88 318 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 CNOT6LQ96LI5 555 aaKnown RBP14.9□□□□□ -0.02
GPC6-201ENST00000377047 RIC8AQ9NPQ8 531 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 TACC3Q9Y6A5 838 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 PREX2Q70Z35 1606 aa14.9□□□□□ -0.02
GPC6-201ENST00000377047 KRIT1O00522 736 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 ZNF131P52739 623 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 ZNF445P59923 1031 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 ADAT2Q7Z6V5 191 aaKnown RBP14.89□□□□□ -0.03
GPC6-201ENST00000377047 SH3RF3Q8TEJ3 882 aaPredicted RBP14.89□□□□□ -0.03
GPC6-201ENST00000377047 GRK7Q8WTQ7 553 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 KIF9Q9HAQ2 790 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 hCG_1984214I3L0E3 225 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 PSAPP07602 524 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 MYL3P08590 195 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 EIF2AK2P19525 551 aaKnown RBP14.89□□□□□ -0.03
GPC6-201ENST00000377047 TRAPPC10P48553 1259 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 LRRC41Q15345 812 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 CROCCP2Q86T23 111 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 ZNF713Q8N859 430 aaPredicted RBP14.89□□□□□ -0.03
GPC6-201ENST00000377047 TRIM58Q8NG06 486 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 CFAP57Q96MR6 1250 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 PLCB1Q9NQ66 1216 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 FANCLQ9NW38 375 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 ECE2O60344 883 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 NR2F2P24468 414 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 OSTNP61366 133 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 MTMR3Q13615 1198 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 CEP57Q86XR8 500 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 DESI2Q9BSY9 194 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 TYW5A2RUC4 315 aaKnown RBP14.89□□□□□ -0.03
GPC6-201ENST00000377047 PSMC2P35998 433 aaKnown RBP14.89□□□□□ -0.03
GPC6-201ENST00000377047 TFAMQ00059 246 aaKnown RBP14.89□□□□□ -0.03
GPC6-201ENST00000377047 SPATA1Q5VX52 437 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 FOXP4Q8IVH2 680 aaPredicted RBP14.89□□□□□ -0.03
GPC6-201ENST00000377047 RASEFQ8IZ41 740 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 CACYBPQ9HB71 228 aaKnown RBP14.89□□□□□ -0.03
GPC6-201ENST00000377047 TMEM63CQ9P1W3 806 aa14.89□□□□□ -0.03
GPC6-201ENST00000377047 SH2B2O14492 632 aaPredicted RBP14.88□□□□□ -0.03
GPC6-201ENST00000377047 NOL3O60936 208 aaKnown RBP14.88□□□□□ -0.03
GPC6-201ENST00000377047 RINT1Q6NUQ1 792 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 CACTINQ8WUQ7 758 aaKnown RBP14.88□□□□□ -0.03
GPC6-201ENST00000377047 CUEDC2Q9H467 287 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 SAR1BQ9Y6B6 198 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 GH2P01242 217 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 AK8Q96MA6 479 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 COL15A1P39059 1388 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 CLIC2O15247 247 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 SASH1O94885 1247 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 TBC1D9BQ66K14 1250 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 NARFQ9UHQ1 456 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 ZSWIM5Q9P217 1185 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 PDXDC2PQ6P474 469 aa14.88□□□□□ -0.03
GPC6-201ENST00000377047 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.88□□□□□ -0.03
GPC6-201ENST00000377047 PRPF31Q8WWY3 499 aaKnown RBP14.88□□□□□ -0.03
GPC6-201ENST00000377047 CDK12Q9NYV4 1490 aaPredicted RBP14.87□□□□□ -0.03
GPC6-201ENST00000377047 CYP27B1O15528 508 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 CAPN12Q6ZSI9 719 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 GPATCH11Q8N954 259 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 MGARPQ8TDB4 240 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms