RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 TRIP12Q14669 1992 aaPredicted RBP20.44■□□□□ 0.86
HLA-A-201ENST00000376802 MUC3AQ02505 3323 aa20.44■□□□□ 0.86
HLA-A-201ENST00000376802 ARIH2O95376 493 aa20.44■□□□□ 0.86
HLA-A-201ENST00000376802 SUPT20HL2P0C7V6 817 aa20.44■□□□□ 0.86
HLA-A-201ENST00000376802 PPP2R5BQ15173 497 aa20.44■□□□□ 0.86
HLA-A-201ENST00000376802 RPUSD2Q8IZ73 545 aaKnown RBP20.44■□□□□ 0.86
HLA-A-201ENST00000376802 ADGRF4Q8IZF3 695 aa20.44■□□□□ 0.86
HLA-A-201ENST00000376802 MTIF3Q9H2K0 278 aaKnown RBP20.44■□□□□ 0.86
HLA-A-201ENST00000376802 NKX2-4Q9H2Z4 354 aa20.44■□□□□ 0.86
HLA-A-201ENST00000376802 PRDM6Q9NQX0 595 aa20.44■□□□□ 0.86
HLA-A-201ENST00000376802 B4E1Z4 1266 aa20.43■□□□□ 0.86
HLA-A-201ENST00000376802 TXNP10599 105 aaKnown RBP20.43■□□□□ 0.86
HLA-A-201ENST00000376802 NT5C2P49902 561 aa20.43■□□□□ 0.86
HLA-A-201ENST00000376802 RABGGTBP53611 331 aa20.43■□□□□ 0.86
HLA-A-201ENST00000376802 CDC37Q16543 378 aaPredicted RBP20.43■□□□□ 0.86
HLA-A-201ENST00000376802 CCDC62Q6P9F0 684 aa20.43■□□□□ 0.86
HLA-A-201ENST00000376802 ENAHQ8N8S7 591 aaPredicted RBP20.43■□□□□ 0.86
HLA-A-201ENST00000376802 TAAR1Q96RJ0 339 aa20.43■□□□□ 0.86
HLA-A-201ENST00000376802 ZSCAN10Q96SZ4 725 aaPredicted RBP20.43■□□□□ 0.86
HLA-A-201ENST00000376802 MAF1Q9H063 256 aa20.43■□□□□ 0.86
HLA-A-201ENST00000376802 DIAPH3Q9NSV4 1193 aa20.43■□□□□ 0.86
HLA-A-201ENST00000376802 ZSWIM5Q9P217 1185 aa20.43■□□□□ 0.86
HLA-A-201ENST00000376802 COL20A1Q9P218 1284 aa20.43■□□□□ 0.86
HLA-A-201ENST00000376802 TRANK1O15050 2925 aa20.43■□□□□ 0.86
HLA-A-201ENST00000376802 TET1Q8NFU7 2136 aa20.43■□□□□ 0.86
HLA-A-201ENST00000376802 TTLL4Q14679 1199 aa20.42■□□□□ 0.86
HLA-A-201ENST00000376802 CCDC178Q5BJE1 867 aa20.42■□□□□ 0.86
HLA-A-201ENST00000376802 NFRKBQ6P4R8 1299 aa20.42■□□□□ 0.86
HLA-A-201ENST00000376802 IQCA1Q86XH1 822 aa20.42■□□□□ 0.86
HLA-A-201ENST00000376802 EXOC6Q8TAG9 804 aa20.42■□□□□ 0.86
HLA-A-201ENST00000376802 GAS2L1Q99501 681 aaPredicted RBP20.42■□□□□ 0.86
HLA-A-201ENST00000376802 MPHOSPH6Q99547 160 aaKnown RBP20.42■□□□□ 0.86
HLA-A-201ENST00000376802 DSCC1Q9BVC3 393 aa20.42■□□□□ 0.86
HLA-A-201ENST00000376802 KAT14Q9H8E8 782 aa20.42■□□□□ 0.86
HLA-A-201ENST00000376802 GPHNQ9NQX3 736 aaPredicted RBP20.42■□□□□ 0.86
HLA-A-201ENST00000376802 TANC1Q9C0D5 1861 aa20.42■□□□□ 0.86
HLA-A-201ENST00000376802 KPNA6O60684 536 aa20.41■□□□□ 0.86
HLA-A-201ENST00000376802 SYTL5Q8TDW5 730 aaPredicted RBP20.41■□□□□ 0.86
HLA-A-201ENST00000376802 IL25Q9H293 177 aa20.41■□□□□ 0.86
HLA-A-201ENST00000376802 SLC28A3Q9HAS3 691 aa20.41■□□□□ 0.86
HLA-A-201ENST00000376802 SLC4A7Q9Y6M7 1214 aa20.41■□□□□ 0.86
HLA-A-201ENST00000376802 ABCB11O95342 1321 aa20.41■□□□□ 0.86
HLA-A-201ENST00000376802 RAD50Q92878 1312 aa20.41■□□□□ 0.86
HLA-A-201ENST00000376802 MYH7BA7E2Y1 1941 aa20.41■□□□□ 0.86
HLA-A-201ENST00000376802 MYOGP15173 224 aa20.4■□□□□ 0.86
HLA-A-201ENST00000376802 QRICH1Q2TAL8 776 aa20.4■□□□□ 0.86
HLA-A-201ENST00000376802 ASPRV1Q53RT3 343 aa20.4■□□□□ 0.86
HLA-A-201ENST00000376802 BRDTQ58F21 947 aaPredicted RBP20.4■□□□□ 0.86
HLA-A-201ENST00000376802 FAM47CQ5HY64 1035 aa20.4■□□□□ 0.86
HLA-A-201ENST00000376802 JMJD4Q9H9V9 463 aa20.4■□□□□ 0.86
HLA-A-201ENST00000376802 B4DLN1 442 aa20.39■□□□□ 0.85
HLA-A-201ENST00000376802 HIP1O00291 1037 aa20.39■□□□□ 0.85
HLA-A-201ENST00000376802 PFKMP08237 780 aa20.39■□□□□ 0.85
HLA-A-201ENST00000376802 MRPL12P52815 198 aaKnown RBP20.39■□□□□ 0.85
HLA-A-201ENST00000376802 IMMTQ16891 758 aaKnown RBP20.39■□□□□ 0.85
HLA-A-201ENST00000376802 DEFB128Q7Z7B8 93 aa20.39■□□□□ 0.85
HLA-A-201ENST00000376802 NSUN6Q8TEA1 469 aaKnown RBP20.39■□□□□ 0.85
HLA-A-201ENST00000376802 PPM1EQ8WY54 764 aa20.39■□□□□ 0.85
HLA-A-201ENST00000376802 PCDHA11Q9Y5I1 949 aa20.39■□□□□ 0.85
HLA-A-201ENST00000376802 PITPNM1O00562 1244 aa20.38■□□□□ 0.85
HLA-A-201ENST00000376802 ATP2A2P16615 1042 aaKnown RBP20.38■□□□□ 0.85
HLA-A-201ENST00000376802 PTPN11Q06124 597 aaPredicted RBP20.38■□□□□ 0.85
HLA-A-201ENST00000376802 ARHGAP1Q07960 439 aa20.38■□□□□ 0.85
HLA-A-201ENST00000376802 LY6KQ17RY6 165 aa20.38■□□□□ 0.85
HLA-A-201ENST00000376802 TJAP1Q5JTD0 557 aa20.38■□□□□ 0.85
HLA-A-201ENST00000376802 AFG1LQ8WV93 481 aa20.38■□□□□ 0.85
HLA-A-201ENST00000376802 SYMPKQ92797 1274 aaKnown RBP20.38■□□□□ 0.85
HLA-A-201ENST00000376802 CTAGE1Q96RT6 745 aa20.38■□□□□ 0.85
HLA-A-201ENST00000376802 RMDN3Q96TC7 470 aa20.38■□□□□ 0.85
HLA-A-201ENST00000376802 ZBBXA8MT70 800 aa20.37■□□□□ 0.85
HLA-A-201ENST00000376802 OPLAHO14841 1288 aa20.37■□□□□ 0.85
HLA-A-201ENST00000376802 PARP1P09874 1014 aaKnown RBP20.37■□□□□ 0.85
HLA-A-201ENST00000376802 IQCF3P0C7M6 154 aa20.37■□□□□ 0.85
HLA-A-201ENST00000376802 SEPT14Q6ZU15 432 aa20.37■□□□□ 0.85
HLA-A-201ENST00000376802 FBXO11Q86XK2 927 aa20.37■□□□□ 0.85
HLA-A-201ENST00000376802 STAG2Q8N3U4 1231 aa20.37■□□□□ 0.85
HLA-A-201ENST00000376802 KAT2BQ92831 832 aa20.37■□□□□ 0.85
HLA-A-201ENST00000376802 IWS1Q96ST2 819 aa20.37■□□□□ 0.85
HLA-A-201ENST00000376802 VAT1LQ9HCJ6 419 aa20.37■□□□□ 0.85
HLA-A-201ENST00000376802 CTNNA3Q9UI47 895 aa20.37■□□□□ 0.85
HLA-A-201ENST00000376802 PTPRSQ13332 1948 aa20.37■□□□□ 0.85
HLA-A-201ENST00000376802 IGFBP4P22692 258 aa20.36■□□□□ 0.85
HLA-A-201ENST00000376802 SEC23AQ15436 765 aa20.36■□□□□ 0.85
HLA-A-201ENST00000376802 CCDC85BQ15834 202 aaPredicted RBP20.36■□□□□ 0.85
HLA-A-201ENST00000376802 MCF2L2Q86YR7 1114 aa20.36■□□□□ 0.85
HLA-A-201ENST00000376802 YTHDC1Q96MU7 727 aaKnown RBP20.36■□□□□ 0.85
HLA-A-201ENST00000376802 KRT23Q9C075 422 aa20.36■□□□□ 0.85
HLA-A-201ENST00000376802 MRPL11Q9Y3B7 192 aaKnown RBP20.36■□□□□ 0.85
HLA-A-201ENST00000376802 BAZ2BQ9UIF8 2168 aaKnown RBP20.36■□□□□ 0.85
HLA-A-201ENST00000376802 NCOR1O75376 2440 aa20.35■□□□□ 0.85
HLA-A-201ENST00000376802 GH1P01241 217 aa20.35■□□□□ 0.85
HLA-A-201ENST00000376802 MMP3P08254 477 aa20.35■□□□□ 0.85
HLA-A-201ENST00000376802 RFC2P35250 354 aa20.35■□□□□ 0.85
HLA-A-201ENST00000376802 STXBP2Q15833 593 aa20.35■□□□□ 0.85
HLA-A-201ENST00000376802 PPP2R2DQ66LE6 453 aa20.35■□□□□ 0.85
HLA-A-201ENST00000376802 CYB5R4Q7L1T6 521 aa20.35■□□□□ 0.85
HLA-A-201ENST00000376802 MTMR8Q96EF0 704 aa20.35■□□□□ 0.85
HLA-A-201ENST00000376802 CNNM2Q9H8M5 875 aa20.35■□□□□ 0.85
HLA-A-201ENST00000376802 XIRP2A4UGR9 3374 aa20.34■□□□□ 0.85
HLA-A-201ENST00000376802 DHX16O60231 1041 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms