RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 CLK2P49760 499 aaKnown RBP22.88■■□□□ 1.25
DDR1-228ENST00000376575 CCDC83Q8IWF9 413 aa22.88■■□□□ 1.25
DDR1-228ENST00000376575 CUL5Q93034 780 aa22.88■■□□□ 1.25
DDR1-228ENST00000376575 IWS1Q96ST2 819 aa22.88■■□□□ 1.25
DDR1-228ENST00000376575 RMDN3Q96TC7 470 aa22.88■■□□□ 1.25
DDR1-228ENST00000376575 GLT8D2Q9H1C3 349 aa22.88■■□□□ 1.25
DDR1-228ENST00000376575 UNC93B1Q9H1C4 597 aa22.88■■□□□ 1.25
DDR1-228ENST00000376575 PXMP2Q9NR77 195 aa22.88■■□□□ 1.25
DDR1-228ENST00000376575 JAK2O60674 1132 aa22.87■■□□□ 1.25
DDR1-228ENST00000376575 CCND3P30281 292 aaPredicted RBP22.87■■□□□ 1.25
DDR1-228ENST00000376575 MRPL12P52815 198 aaKnown RBP22.87■■□□□ 1.25
DDR1-228ENST00000376575 PRAMEF19Q5SWL8 479 aa22.87■■□□□ 1.25
DDR1-228ENST00000376575 CCDC12Q8WUD4 166 aaPredicted RBP22.87■■□□□ 1.25
DDR1-228ENST00000376575 AIFM3Q96NN9 605 aa22.87■■□□□ 1.25
DDR1-228ENST00000376575 ABHD16BQ9H3Z7 469 aa22.87■■□□□ 1.25
DDR1-228ENST00000376575 HMX1Q9NP08 348 aaPredicted RBP22.87■■□□□ 1.25
DDR1-228ENST00000376575 ORC3Q9UBD5 711 aaPredicted RBP22.87■■□□□ 1.25
DDR1-228ENST00000376575 DDX49Q9Y6V7 483 aaKnown RBP22.87■■□□□ 1.25
DDR1-228ENST00000376575 DTNBO60941 627 aa22.86■■□□□ 1.25
DDR1-228ENST00000376575 ADCY7P51828 1080 aa22.86■■□□□ 1.25
DDR1-228ENST00000376575 NPY5RQ15761 445 aa22.86■■□□□ 1.25
DDR1-228ENST00000376575 PDCD2LQ9BRP1 358 aa22.86■■□□□ 1.25
DDR1-228ENST00000376575 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.86■■□□□ 1.25
DDR1-228ENST00000376575 VPS54Q9P1Q0 977 aa22.86■■□□□ 1.25
DDR1-228ENST00000376575 ADAMTS3O15072 1205 aa22.85■■□□□ 1.25
DDR1-228ENST00000376575 GJB1P08034 283 aa22.85■■□□□ 1.25
DDR1-228ENST00000376575 ACVR2BQ13705 512 aa22.85■■□□□ 1.25
DDR1-228ENST00000376575 CCDC148Q8NFR7 591 aa22.85■■□□□ 1.25
DDR1-228ENST00000376575 SNX21Q969T3 373 aa22.85■■□□□ 1.25
DDR1-228ENST00000376575 CNPY2Q9Y2B0 182 aa22.85■■□□□ 1.25
DDR1-228ENST00000376575 B4DLN1 442 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 SEPT4O43236 478 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 NR3C2P08235 984 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 GNA11P29992 359 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 PGM5Q15124 567 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 UBE2SQ16763 222 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 ARHGEF16Q5VV41 709 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 LHX8Q68G74 356 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 TAPT1Q6NXT6 567 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 VSIG10LQ86VR7 867 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 FCHSD1Q86WN1 690 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 WASF1Q92558 559 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 RNF208Q9H0X6 261 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 VTA1Q9NP79 307 aa22.84■■□□□ 1.25
DDR1-228ENST00000376575 RBM47A0AV96 593 aaKnown RBP22.83■■□□□ 1.25
DDR1-228ENST00000376575 M0R2N6 131 aa22.83■■□□□ 1.25
DDR1-228ENST00000376575 EIF2AK2P19525 551 aaKnown RBP22.83■■□□□ 1.25
DDR1-228ENST00000376575 CUL4AQ13619 759 aa22.83■■□□□ 1.25
DDR1-228ENST00000376575 DAGLBQ8NCG7 672 aa22.83■■□□□ 1.25
DDR1-228ENST00000376575 MPHOSPH6Q99547 160 aaKnown RBP22.83■■□□□ 1.25
DDR1-228ENST00000376575 CRISPLD2Q9H0B8 497 aa22.83■■□□□ 1.25
DDR1-228ENST00000376575 C6orf50Q9HD87 102 aa22.83■■□□□ 1.25
DDR1-228ENST00000376575 KIAA1217Q5T5P2 1943 aa22.82■■□□□ 1.24
DDR1-228ENST00000376575 FOSP01100 380 aaPredicted RBP22.82■■□□□ 1.24
DDR1-228ENST00000376575 HMGN5P82970 282 aaKnown RBP22.82■■□□□ 1.24
DDR1-228ENST00000376575 AP3B2Q13367 1082 aa22.82■■□□□ 1.24
DDR1-228ENST00000376575 GALNT17Q6IS24 598 aa22.82■■□□□ 1.24
DDR1-228ENST00000376575 IL31RAQ8NI17 732 aa22.82■■□□□ 1.24
DDR1-228ENST00000376575 ALG1Q9BT22 464 aa22.82■■□□□ 1.24
DDR1-228ENST00000376575 PHF20Q9BVI0 1012 aa22.82■■□□□ 1.24
DDR1-228ENST00000376575 PCDHA6Q9UN73 950 aa22.82■■□□□ 1.24
DDR1-228ENST00000376575 PCDHA8Q9Y5H6 950 aa22.82■■□□□ 1.24
DDR1-228ENST00000376575 FRMPD3Q5JV73 1810 aa22.81■■□□□ 1.24
DDR1-228ENST00000376575 MSCO60682 206 aa22.81■■□□□ 1.24
DDR1-228ENST00000376575 MYCP01106 439 aaPredicted RBP22.81■■□□□ 1.24
DDR1-228ENST00000376575 CAPN2P17655 700 aa22.81■■□□□ 1.24
DDR1-228ENST00000376575 GJA8P48165 433 aa22.81■■□□□ 1.24
DDR1-228ENST00000376575 PDE4DQ08499 809 aa22.81■■□□□ 1.24
DDR1-228ENST00000376575 STXBP2Q15833 593 aa22.81■■□□□ 1.24
DDR1-228ENST00000376575 BICD2Q8TD16 824 aa22.81■■□□□ 1.24
DDR1-228ENST00000376575 CRYGNQ8WXF5 182 aa22.81■■□□□ 1.24
DDR1-228ENST00000376575 DDX20Q9UHI6 824 aaKnown RBP22.81■■□□□ 1.24
DDR1-228ENST00000376575 PCDHA4Q9UN74 947 aa22.81■■□□□ 1.24
DDR1-228ENST00000376575 SPDYE3A6NKU9 549 aa22.8■■□□□ 1.24
DDR1-228ENST00000376575 EIF3JO75822 258 aaKnown RBP22.8■■□□□ 1.24
DDR1-228ENST00000376575 RGS20O76081 388 aa22.8■■□□□ 1.24
DDR1-228ENST00000376575 SGPL1O95470 568 aa22.8■■□□□ 1.24
DDR1-228ENST00000376575 AKR1A1P14550 325 aa22.8■■□□□ 1.24
DDR1-228ENST00000376575 MRPS9P82933 396 aaKnown RBP22.8■■□□□ 1.24
DDR1-228ENST00000376575 CCDC144BQ3MJ40 725 aa22.8■■□□□ 1.24
DDR1-228ENST00000376575 PCNX4Q63HM2 1172 aa22.8■■□□□ 1.24
DDR1-228ENST00000376575 MCTP2Q6DN12 878 aa22.8■■□□□ 1.24
DDR1-228ENST00000376575 XRRA1Q6P2D8 792 aa22.8■■□□□ 1.24
DDR1-228ENST00000376575 FBXO16Q8IX29 292 aaPredicted RBP22.8■■□□□ 1.24
DDR1-228ENST00000376575 PDGFCQ9NRA1 345 aa22.8■■□□□ 1.24
DDR1-228ENST00000376575 GJB4Q9NTQ9 266 aa22.8■■□□□ 1.24
DDR1-228ENST00000376575 ADCY6O43306 1168 aa22.79■■□□□ 1.24
DDR1-228ENST00000376575 STAM2O75886 525 aa22.79■■□□□ 1.24
DDR1-228ENST00000376575 XBP1P17861 261 aa22.79■■□□□ 1.24
DDR1-228ENST00000376575 NLRP5P59047 1200 aa22.79■■□□□ 1.24
DDR1-228ENST00000376575 REXO1Q8N1G1 1221 aaKnown RBP22.79■■□□□ 1.24
DDR1-228ENST00000376575 U2AF1L4Q8WU68 220 aaKnown RBP22.79■■□□□ 1.24
DDR1-228ENST00000376575 DEFB118Q96PH6 123 aa22.79■■□□□ 1.24
DDR1-228ENST00000376575 TMEM106CQ9BVX2 250 aa22.79■■□□□ 1.24
DDR1-228ENST00000376575 TMEM260Q9NX78 707 aa22.79■■□□□ 1.24
DDR1-228ENST00000376575 ZHX1Q9UKY1 873 aaPredicted RBP22.79■■□□□ 1.24
DDR1-228ENST00000376575 OGDHLQ9ULD0 1010 aa22.79■■□□□ 1.24
DDR1-228ENST00000376575 FAM184BQ9ULE4 1060 aa22.79■■□□□ 1.24
DDR1-228ENST00000376575 POTEFA5A3E0 1075 aa22.78■■□□□ 1.24
DDR1-228ENST00000376575 CCND2P30279 289 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms