RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ACRP10323 421 aa16.58■□□□□ 0.24
NELFE-201ENST00000375425 PURAQ00577 322 aaKnown RBP16.58■□□□□ 0.24
NELFE-201ENST00000375425 TTLL4Q14679 1199 aa16.58■□□□□ 0.24
NELFE-201ENST00000375425 BRDTQ58F21 947 aaPredicted RBP16.58■□□□□ 0.24
NELFE-201ENST00000375425 NSUN6Q8TEA1 469 aaKnown RBP16.58■□□□□ 0.24
NELFE-201ENST00000375425 CDX2Q99626 313 aaPredicted RBP16.58■□□□□ 0.24
NELFE-201ENST00000375425 AMNQ9BXJ7 453 aa16.58■□□□□ 0.24
NELFE-201ENST00000375425 TTYH1Q9H313 450 aaPredicted RBP16.58■□□□□ 0.24
NELFE-201ENST00000375425 HIPK3Q9H422 1215 aa16.58■□□□□ 0.24
NELFE-201ENST00000375425 COL20A1Q9P218 1284 aa16.58■□□□□ 0.24
NELFE-201ENST00000375425 LAMA4Q16363 1823 aa16.58■□□□□ 0.24
NELFE-201ENST00000375425 E7EWF7 191 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 ARIH2O95376 493 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 CFBP00751 764 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 STXBP2Q15833 593 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 ZNF365Q70YC5 407 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 RALYLQ86SE5 291 aaKnown RBP16.57■□□□□ 0.24
NELFE-201ENST00000375425 NCOA7Q8NI08 942 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 MAP4K1Q92918 833 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 IWS1Q96ST2 819 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 RMDN3Q96TC7 470 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 MTG1Q9BT17 334 aaPredicted RBP16.57■□□□□ 0.24
NELFE-201ENST00000375425 ALDH8A1Q9H2A2 487 aaPredicted RBP16.57■□□□□ 0.24
NELFE-201ENST00000375425 SENP2Q9HC62 589 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 VCANP13611 3396 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 UMODL1Q5DID0 1318 aa16.57■□□□□ 0.24
NELFE-201ENST00000375425 ERICH2A1L162 156 aa16.56■□□□□ 0.24
NELFE-201ENST00000375425 A6NJR5 290 aa16.56■□□□□ 0.24
NELFE-201ENST00000375425 CCL23P55773 120 aa16.56■□□□□ 0.24
NELFE-201ENST00000375425 SEPT14Q6ZU15 432 aa16.56■□□□□ 0.24
NELFE-201ENST00000375425 CHST3Q7LGC8 479 aa16.56■□□□□ 0.24
NELFE-201ENST00000375425 MTMR8Q96EF0 704 aa16.56■□□□□ 0.24
NELFE-201ENST00000375425 IL23AQ9NPF7 189 aa16.56■□□□□ 0.24
NELFE-201ENST00000375425 LRRC37A2A6NM11 1700 aa16.56■□□□□ 0.24
NELFE-201ENST00000375425 ZBTB5O15062 677 aa16.55■□□□□ 0.24
NELFE-201ENST00000375425 PPP1R11O60927 126 aaPredicted RBP16.55■□□□□ 0.24
NELFE-201ENST00000375425 WTAPQ15007 396 aa16.55■□□□□ 0.24
NELFE-201ENST00000375425 LY6KQ17RY6 165 aa16.55■□□□□ 0.24
NELFE-201ENST00000375425 NBPF20Q3BBV1 942 aa16.55■□□□□ 0.24
NELFE-201ENST00000375425 ARHGEF16Q5VV41 709 aa16.55■□□□□ 0.24
NELFE-201ENST00000375425 CCDC62Q6P9F0 684 aa16.55■□□□□ 0.24
NELFE-201ENST00000375425 PSRC1Q6PGN9 363 aaPredicted RBP16.55■□□□□ 0.24
NELFE-201ENST00000375425 STOX1Q6ZVD7 989 aa16.55■□□□□ 0.24
NELFE-201ENST00000375425 NOC4LQ9BVI4 516 aaKnown RBP16.55■□□□□ 0.24
NELFE-201ENST00000375425 TRMT13Q9NUP7 481 aaKnown RBP16.55■□□□□ 0.24
NELFE-201ENST00000375425 PCDHA1Q9Y5I3 950 aa16.55■□□□□ 0.24
NELFE-201ENST00000375425 OPLAHO14841 1288 aa16.54■□□□□ 0.24
NELFE-201ENST00000375425 KPNA6O60684 536 aa16.54■□□□□ 0.24
NELFE-201ENST00000375425 SUPT20HL2P0C7V6 817 aa16.54■□□□□ 0.24
NELFE-201ENST00000375425 EIF2AK2P19525 551 aaKnown RBP16.54■□□□□ 0.24
NELFE-201ENST00000375425 TROAPQ12815 778 aa16.54■□□□□ 0.24
NELFE-201ENST00000375425 GRM4Q14833 912 aa16.54■□□□□ 0.24
NELFE-201ENST00000375425 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
NELFE-201ENST00000375425 SLC35G1Q2M3R5 365 aa16.54■□□□□ 0.24
NELFE-201ENST00000375425 RASIP1Q5U651 963 aa16.54■□□□□ 0.24
NELFE-201ENST00000375425 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
NELFE-201ENST00000375425 PXMP2Q9NR77 195 aa16.54■□□□□ 0.24
NELFE-201ENST00000375425 EIF3JO75822 258 aaKnown RBP16.53■□□□□ 0.24
NELFE-201ENST00000375425 FGBP02675 491 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 NR3C2P08235 984 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 CYP2C9P11712 490 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 DNAJB2P25686 324 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 HSD17B4P51659 736 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 TMEM67Q5HYA8 995 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 IGDCC4Q8TDY8 1250 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 PPP1R13LQ8WUF5 828 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 PIGSQ96S52 555 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 WNT8AQ9H1J5 351 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 RIOX1Q9H6W3 641 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 MAP3K20Q9NYL2 800 aaKnown RBP16.53■□□□□ 0.24
NELFE-201ENST00000375425 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
NELFE-201ENST00000375425 TMEM265A0A087WTH1 108 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 GRXCR1A8MXD5 290 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 CYTH3O43739 400 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 GH1P01241 217 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 ANTXR2P58335 489 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 GHRHRQ02643 423 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 FAM47CQ5HY64 1035 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 NFRKBQ6P4R8 1299 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 OTOP2Q7RTS6 562 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 CATIPQ7Z7H3 387 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 AFG1LQ8WV93 481 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 HERVK_113Q902F9 699 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 SCLYQ96I15 445 aa16.53■□□□□ 0.24
NELFE-201ENST00000375425 DLL1O00548 723 aa16.52■□□□□ 0.23
NELFE-201ENST00000375425 HOXA13P31271 388 aaPredicted RBP16.52■□□□□ 0.23
NELFE-201ENST00000375425 CHMP4BP1P59074 171 aa16.52■□□□□ 0.23
NELFE-201ENST00000375425 MB21D2Q8IYB1 491 aaPredicted RBP16.52■□□□□ 0.23
NELFE-201ENST00000375425 RPUSD2Q8IZ73 545 aaKnown RBP16.52■□□□□ 0.23
NELFE-201ENST00000375425 MYLIPQ8WY64 445 aa16.52■□□□□ 0.23
NELFE-201ENST00000375425 TIFAQ96CG3 184 aa16.52■□□□□ 0.23
NELFE-201ENST00000375425 CXXC1Q9P0U4 656 aaPredicted RBP16.52■□□□□ 0.23
NELFE-201ENST00000375425 DDX41Q9UJV9 622 aaKnown RBP16.52■□□□□ 0.23
NELFE-201ENST00000375425 SPTBN5Q9NRC6 3674 aaKnown RBP16.51■□□□□ 0.23
NELFE-201ENST00000375425 PNMA6FA0A0J9YX94 578 aa16.51■□□□□ 0.23
NELFE-201ENST00000375425 MYCLP12524 364 aaPredicted RBP16.51■□□□□ 0.23
NELFE-201ENST00000375425 PBX2P40425 430 aa16.51■□□□□ 0.23
NELFE-201ENST00000375425 ARHGAP1Q07960 439 aa16.51■□□□□ 0.23
NELFE-201ENST00000375425 TRAF1Q13077 416 aa16.51■□□□□ 0.23
NELFE-201ENST00000375425 GRIN2CQ14957 1233 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms