RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 USP17L8P0C7I0 530 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 NR2F2P24468 414 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 ERFEQ4G0M1 354 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 FYB2Q5VWT5 728 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 ENAHQ8N8S7 591 aaPredicted RBP19.1■□□□□ 0.65
PTPRU-202ENST00000373779 BAIAP2L1Q9UHR4 511 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 HGSO14964 777 aaPredicted RBP19.1■□□□□ 0.65
PTPRU-202ENST00000373779 MECOMQ03112 1051 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 MTF1Q14872 753 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 ASPRV1Q53RT3 343 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 PIGSQ96S52 555 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 AP5Z1O43299 807 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 SLC7A5Q01650 507 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 NNTQ13423 1086 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 PFKFB3Q16875 520 aaPredicted RBP19.1■□□□□ 0.65
PTPRU-202ENST00000373779 MAIP1Q8WWC4 291 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 ST7Q9NRC1 585 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 SP4Q02446 784 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 CCDC63Q8NA47 563 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 MSANTD4Q8NCY6 345 aa19.1■□□□□ 0.65
PTPRU-202ENST00000373779 ZSCAN20P17040 1043 aaPredicted RBP19.09■□□□□ 0.65
PTPRU-202ENST00000373779 ADAT2Q7Z6V5 191 aaKnown RBP19.09■□□□□ 0.65
PTPRU-202ENST00000373779 VSIG1Q86XK7 387 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 MGARPQ8TDB4 240 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 PARP3Q9Y6F1 533 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 CEP170BQ9Y4F5 1589 aaPredicted RBP19.09■□□□□ 0.65
PTPRU-202ENST00000373779 GSG1L2A8MUP6 293 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 hCG_1984214I3L0E3 225 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 MYO1CO00159 1063 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 BACH1O14867 736 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 GAS7O60861 476 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 SERPING1P05155 500 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 ZNF713Q8N859 430 aaPredicted RBP19.09■□□□□ 0.65
PTPRU-202ENST00000373779 ANO9A1A5B4 782 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 MRRFQ96E11 262 aaKnown RBP19.09■□□□□ 0.65
PTPRU-202ENST00000373779 MROH7-TTC4A0A0A0MT08 1334 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 GAS8O95995 478 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 GUCY1A2P33402 732 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 EMBQ6PCB8 327 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 DYNLL2Q96FJ2 89 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 HOMER3Q9NSC5 361 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 STIM2Q9P246 746 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 ATP2B4P23634 1241 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 RFX5P48382 616 aaPredicted RBP19.09■□□□□ 0.65
PTPRU-202ENST00000373779 LRRC63Q05C16 580 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 FMR1Q06787 632 aaKnown RBP eCLIP19.09■□□□□ 0.65
PTPRU-202ENST00000373779 FAM133AQ8N9E0 248 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 TSNARE1Q96NA8 513 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 AGTPBP1Q9UPW5 1226 aa19.09■□□□□ 0.65
PTPRU-202ENST00000373779 PSMD2Q13200 908 aa19.08■□□□□ 0.65
PTPRU-202ENST00000373779 HOXA7P31268 230 aaPredicted RBP19.08■□□□□ 0.65
PTPRU-202ENST00000373779 UAP1Q16222 522 aaPredicted RBP19.08■□□□□ 0.65
PTPRU-202ENST00000373779 NAA35Q5VZE5 725 aa19.08■□□□□ 0.65
PTPRU-202ENST00000373779 SREK1Q8WXA9 508 aaKnown RBP19.08■□□□□ 0.65
PTPRU-202ENST00000373779 FAM114A2Q9NRY5 505 aa19.08■□□□□ 0.65
PTPRU-202ENST00000373779 A0A1B0GTH6 734 aa19.08■□□□□ 0.64
PTPRU-202ENST00000373779 PGRMC1O00264 195 aaKnown RBP19.08■□□□□ 0.64
PTPRU-202ENST00000373779 AFPP02771 609 aaKnown RBP19.08■□□□□ 0.64
PTPRU-202ENST00000373779 ANKRD42Q8N9B4 389 aa19.08■□□□□ 0.64
PTPRU-202ENST00000373779 SHPRHQ149N8 1683 aa19.08■□□□□ 0.64
PTPRU-202ENST00000373779 SNAP23O00161 211 aa19.08■□□□□ 0.64
PTPRU-202ENST00000373779 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.64
PTPRU-202ENST00000373779 PREX1Q8TCU6 1659 aa19.07■□□□□ 0.64
PTPRU-202ENST00000373779 FERP16591 822 aa19.07■□□□□ 0.64
PTPRU-202ENST00000373779 GBP1P32455 592 aa19.07■□□□□ 0.64
PTPRU-202ENST00000373779 DGKHQ86XP1 1220 aa19.07■□□□□ 0.64
PTPRU-202ENST00000373779 GJA10Q969M2 543 aa19.07■□□□□ 0.64
PTPRU-202ENST00000373779 FEZ2Q9UHY8 353 aaPredicted RBP19.07■□□□□ 0.64
PTPRU-202ENST00000373779 ANTXR2P58335 489 aa19.07■□□□□ 0.64
PTPRU-202ENST00000373779 IFT88Q13099 833 aa19.07■□□□□ 0.64
PTPRU-202ENST00000373779 USP17L3A6NCW0 530 aa19.07■□□□□ 0.64
PTPRU-202ENST00000373779 USP17L4A6NCW7 530 aa19.07■□□□□ 0.64
PTPRU-202ENST00000373779 USP17L1Q7RTZ2 530 aa19.07■□□□□ 0.64
PTPRU-202ENST00000373779 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.07■□□□□ 0.64
PTPRU-202ENST00000373779 GCFC2P16383 781 aaKnown RBP19.07■□□□□ 0.64
PTPRU-202ENST00000373779 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.07■□□□□ 0.64
PTPRU-202ENST00000373779 WHAMMQ8TF30 809 aa19.07■□□□□ 0.64
PTPRU-202ENST00000373779 MPHOSPH6Q99547 160 aaKnown RBP19.07■□□□□ 0.64
PTPRU-202ENST00000373779 LMNB1P20700 586 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 ZYXQ15942 572 aaKnown RBP19.06■□□□□ 0.64
PTPRU-202ENST00000373779 FAM178BQ8IXR5 827 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 USTQ9Y2C2 406 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 USP17L2Q6R6M4 530 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 PBKQ96KB5 322 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 PCDHA1Q9Y5I3 950 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 STX2P32856 288 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 CACNB1Q02641 598 aaPredicted RBP19.06■□□□□ 0.64
PTPRU-202ENST00000373779 SEPT2Q15019 361 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 PPFIBP2Q8ND30 876 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 TEKT1Q969V4 418 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 LEMD3Q9Y2U8 911 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 TTC26A0AVF1 554 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 N4BP1O75113 896 aaKnown RBP19.06■□□□□ 0.64
PTPRU-202ENST00000373779 HHATQ5VTY9 493 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 DPH6Q7L8W6 267 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 STMN2Q93045 179 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 A0A0G2JLW4 131 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 TRIM37O94972 964 aa19.06■□□□□ 0.64
PTPRU-202ENST00000373779 XDHP47989 1333 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 PABPC4Q13310 644 aaKnown RBP eCLIP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms