RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 PURAQ00577 322 aaKnown RBP20.91■□□□□ 0.94
TRAPPC3-202ENST00000373162 SART3Q15020 963 aaKnown RBP20.91■□□□□ 0.94
TRAPPC3-202ENST00000373162 NOL8Q76FK4 1167 aaKnown RBP20.91■□□□□ 0.94
TRAPPC3-202ENST00000373162 ZNF654Q8IZM8 581 aa20.91■□□□□ 0.94
TRAPPC3-202ENST00000373162 SAMD3Q8N6K7 520 aa20.91■□□□□ 0.94
TRAPPC3-202ENST00000373162 NSUN6Q8TEA1 469 aaKnown RBP20.91■□□□□ 0.94
TRAPPC3-202ENST00000373162 COPS5Q92905 334 aa20.91■□□□□ 0.94
TRAPPC3-202ENST00000373162 IWS1Q96ST2 819 aa20.91■□□□□ 0.94
TRAPPC3-202ENST00000373162 TMEM39AQ9NV64 488 aa20.91■□□□□ 0.94
TRAPPC3-202ENST00000373162 MAP3K20Q9NYL2 800 aaKnown RBP20.91■□□□□ 0.94
TRAPPC3-202ENST00000373162 ERICH2A1L162 156 aa20.9■□□□□ 0.94
TRAPPC3-202ENST00000373162 PRC1O43663 620 aa20.9■□□□□ 0.94
TRAPPC3-202ENST00000373162 DHX16O60231 1041 aaKnown RBP20.9■□□□□ 0.94
TRAPPC3-202ENST00000373162 TIMP1P01033 207 aa20.9■□□□□ 0.94
TRAPPC3-202ENST00000373162 RAG1P15918 1043 aa20.9■□□□□ 0.94
TRAPPC3-202ENST00000373162 ITGA7Q13683 1181 aa20.9■□□□□ 0.94
TRAPPC3-202ENST00000373162 RMDN3Q96TC7 470 aa20.9■□□□□ 0.94
TRAPPC3-202ENST00000373162 SPZ1Q9BXG8 430 aa20.9■□□□□ 0.94
TRAPPC3-202ENST00000373162 SEZ6LQ9BYH1 1024 aa20.9■□□□□ 0.94
TRAPPC3-202ENST00000373162 PXMP2Q9NR77 195 aa20.9■□□□□ 0.94
TRAPPC3-202ENST00000373162 PCDHA1Q9Y5I3 950 aa20.9■□□□□ 0.94
TRAPPC3-202ENST00000373162 FRMPD4Q14CM0 1322 aa20.89■□□□□ 0.93
TRAPPC3-202ENST00000373162 RGS20O76081 388 aa20.89■□□□□ 0.93
TRAPPC3-202ENST00000373162 LIFRP42702 1097 aa20.89■□□□□ 0.93
TRAPPC3-202ENST00000373162 PPP2R5BQ15173 497 aa20.89■□□□□ 0.93
TRAPPC3-202ENST00000373162 TSGA10IPQ3SY00 556 aa20.89■□□□□ 0.93
TRAPPC3-202ENST00000373162 TMEM87BQ96K49 555 aa20.89■□□□□ 0.93
TRAPPC3-202ENST00000373162 MPHOSPH6Q99547 160 aaKnown RBP20.89■□□□□ 0.93
TRAPPC3-202ENST00000373162 PDCD2LQ9BRP1 358 aa20.89■□□□□ 0.93
TRAPPC3-202ENST00000373162 MYL10Q9BUA6 226 aa20.89■□□□□ 0.93
TRAPPC3-202ENST00000373162 ANO2Q9NQ90 1003 aa20.89■□□□□ 0.93
TRAPPC3-202ENST00000373162 PNMA6FA0A0J9YX94 578 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 ZEB2O60315 1214 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 SMARCA1P28370 1054 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 MCM5P33992 734 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 PSMC6P62333 389 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 ARHGAP1Q07960 439 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 FAM109BQ6ICB4 259 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 MFSD5Q6N075 450 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 C16orf59Q7L2K0 433 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 CATIPQ7Z7H3 387 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 SGMS1Q86VZ5 419 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 OR6J1Q8NGC5 347 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 POLR3EQ9NVU0 708 aa20.88■□□□□ 0.93
TRAPPC3-202ENST00000373162 B4DLN1 442 aa20.87■□□□□ 0.93
TRAPPC3-202ENST00000373162 CFBP00751 764 aa20.87■□□□□ 0.93
TRAPPC3-202ENST00000373162 NR3C2P08235 984 aa20.87■□□□□ 0.93
TRAPPC3-202ENST00000373162 TXNP10599 105 aaKnown RBP20.87■□□□□ 0.93
TRAPPC3-202ENST00000373162 CPT1AP50416 773 aa20.87■□□□□ 0.93
TRAPPC3-202ENST00000373162 MRPL12P52815 198 aaKnown RBP20.87■□□□□ 0.93
TRAPPC3-202ENST00000373162 FPGSQ05932 587 aa20.87■□□□□ 0.93
TRAPPC3-202ENST00000373162 HOMER1Q86YM7 354 aa20.87■□□□□ 0.93
TRAPPC3-202ENST00000373162 IL31RAQ8NI17 732 aa20.87■□□□□ 0.93
TRAPPC3-202ENST00000373162 VWCEQ96DN2 955 aa20.87■□□□□ 0.93
TRAPPC3-202ENST00000373162 UNC80Q8N2C7 3258 aa20.87■□□□□ 0.93
TRAPPC3-202ENST00000373162 B4GALT4O60513 344 aa20.86■□□□□ 0.93
TRAPPC3-202ENST00000373162 CDC45O75419 566 aa20.86■□□□□ 0.93
TRAPPC3-202ENST00000373162 EIF2AK2P19525 551 aaKnown RBP20.86■□□□□ 0.93
TRAPPC3-202ENST00000373162 TTLL4Q14679 1199 aa20.86■□□□□ 0.93
TRAPPC3-202ENST00000373162 STXBP2Q15833 593 aa20.86■□□□□ 0.93
TRAPPC3-202ENST00000373162 RASIP1Q5U651 963 aa20.86■□□□□ 0.93
TRAPPC3-202ENST00000373162 Q7L0L9 218 aa20.86■□□□□ 0.93
TRAPPC3-202ENST00000373162 RASEFQ8IZ41 740 aa20.86■□□□□ 0.93
TRAPPC3-202ENST00000373162 KCNB2Q92953 911 aa20.86■□□□□ 0.93
TRAPPC3-202ENST00000373162 MTMR10Q9NXD2 777 aa20.86■□□□□ 0.93
TRAPPC3-202ENST00000373162 UMODL1Q5DID0 1318 aa20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 TLR3O15455 904 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 EIF3JO75822 258 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 PLEKHA8P1O95397 391 aa20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 EXOSC10Q01780 885 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 CASC1Q6TDU7 716 aa20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 VSIG10LQ86VR7 867 aa20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 TMTC2Q8N394 836 aa20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 SRBD1Q8N5C6 995 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 EMID1Q96A84 441 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 VTI1AQ96AJ9 217 aa20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 NOC4LQ9BVI4 516 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 TRPV6Q9H1D0 765 aa20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 ALDH8A1Q9H2A2 487 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 DDX41Q9UJV9 622 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-202ENST00000373162 HOXD8P13378 290 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC3-202ENST00000373162 HOXA13P31271 388 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC3-202ENST00000373162 TRAF1Q13077 416 aa20.84■□□□□ 0.93
TRAPPC3-202ENST00000373162 PGM5Q15124 567 aa20.84■□□□□ 0.93
TRAPPC3-202ENST00000373162 LY6KQ17RY6 165 aa20.84■□□□□ 0.93
TRAPPC3-202ENST00000373162 ARHGEF16Q5VV41 709 aa20.84■□□□□ 0.93
TRAPPC3-202ENST00000373162 DEFB123Q8N688 67 aa20.84■□□□□ 0.93
TRAPPC3-202ENST00000373162 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.84■□□□□ 0.931e-7■■■■■ 27.7
TRAPPC3-202ENST00000373162 MTG1Q9BT17 334 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC3-202ENST00000373162 WNT8AQ9H1J5 351 aa20.84■□□□□ 0.93
TRAPPC3-202ENST00000373162 TANC1Q9C0D5 1861 aa20.84■□□□□ 0.93
TRAPPC3-202ENST00000373162 KPNA6O60684 536 aa20.83■□□□□ 0.93
TRAPPC3-202ENST00000373162 MMP3P08254 477 aa20.83■□□□□ 0.93
TRAPPC3-202ENST00000373162 SMAD3P84022 425 aaKnown RBP20.83■□□□□ 0.93
TRAPPC3-202ENST00000373162 ADCK5Q3MIX3 580 aa20.83■□□□□ 0.93
TRAPPC3-202ENST00000373162 TMEM240Q5SV17 173 aa20.83■□□□□ 0.93
TRAPPC3-202ENST00000373162 SEPT14Q6ZU15 432 aa20.83■□□□□ 0.93
TRAPPC3-202ENST00000373162 KAT2BQ92831 832 aa20.83■□□□□ 0.93
TRAPPC3-202ENST00000373162 CTAGE1Q96RT6 745 aa20.83■□□□□ 0.93
TRAPPC3-202ENST00000373162 LRRC2Q9BYS8 371 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms