RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 TBC1D8BQ0IIM8 1120 aa20.18■□□□□ 0.82
CD40-201ENST00000372276 WHAMMP3Q1A5X7 153 aa20.18■□□□□ 0.82
CD40-201ENST00000372276 CDC42EP5Q6NZY7 148 aa20.18■□□□□ 0.82
CD40-201ENST00000372276 MOXD1Q6UVY6 613 aa20.18■□□□□ 0.82
CD40-201ENST00000372276 SLC51AQ86UW1 340 aa20.18■□□□□ 0.82
CD40-201ENST00000372276 POTEDQ86YR6 584 aa20.18■□□□□ 0.82
CD40-201ENST00000372276 NAPGQ99747 312 aaPredicted RBP20.18■□□□□ 0.82
CD40-201ENST00000372276 CPVLQ9H3G5 476 aa20.18■□□□□ 0.82
CD40-201ENST00000372276 BMP2KQ9NSY1 1161 aaPredicted RBP20.18■□□□□ 0.82
CD40-201ENST00000372276 NYAP2Q9P242 653 aa20.18■□□□□ 0.82
CD40-201ENST00000372276 TRIM49BA6NDI0 452 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 FANCGO15287 622 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 KIF20AO95235 890 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 NDUFA10O95299 355 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 PRKCSHP14314 528 aaPredicted RBP20.17■□□□□ 0.82
CD40-201ENST00000372276 MTIF2P46199 727 aaKnown RBP20.17■□□□□ 0.82
CD40-201ENST00000372276 USP11P51784 963 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 CLCN6P51797 869 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 ERVK-24P63145 666 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 GRB10Q13322 594 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 MEA1Q16626 185 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 ZNF569Q5MCW4 686 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 CCDC84Q86UT8 332 aaPredicted RBP20.17■□□□□ 0.82
CD40-201ENST00000372276 LRRC47Q8N1G4 583 aaKnown RBP20.17■□□□□ 0.82
CD40-201ENST00000372276 CERS5Q8N5B7 392 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 RAD54LQ92698 747 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 PLIN2Q99541 437 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 KANSL2Q9H9L4 492 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 GPCPD1Q9NPB8 672 aa20.17■□□□□ 0.82
CD40-201ENST00000372276 TTC26A0AVF1 554 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 KIF4BQ2VIQ3 1234 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 TMEM119Q4V9L6 283 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 HYIQ5T013 277 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 STRIP1Q5VSL9 837 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 ANKRD40Q6AI12 368 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 APOBEC3HQ6NTF7 200 aaKnown RBP20.16■□□□□ 0.82
CD40-201ENST00000372276 COA7Q96BR5 231 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 CNOT6LQ96LI5 555 aaKnown RBP20.16■□□□□ 0.82
CD40-201ENST00000372276 TSG101Q99816 390 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 IDI2Q9BXS1 227 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 PSTPIP2Q9H939 334 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 DDX4Q9NQI0 724 aaKnown RBP20.16■□□□□ 0.82
CD40-201ENST00000372276 SYNPO2Q9UMS6 1093 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 PES1O00541 588 aaKnown RBP20.16■□□□□ 0.82
CD40-201ENST00000372276 MARCH6O60337 910 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 PMS1P54277 932 aaKnown RBP20.16■□□□□ 0.82
CD40-201ENST00000372276 DMTNQ08495 405 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 STK4Q13043 487 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 TRAF1Q13077 416 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 BRD3Q15059 726 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 CCDC96Q2M329 555 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 TXLNBQ8N3L3 684 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 NOC4LQ9BVI4 516 aaKnown RBP20.16■□□□□ 0.82
CD40-201ENST00000372276 EDEM3Q9BZQ6 932 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 TMEM260Q9NX78 707 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 PI4KBQ9UBF8 816 aa20.16■□□□□ 0.82
CD40-201ENST00000372276 DDX25Q9UHL0 483 aaKnown RBP20.16■□□□□ 0.82
CD40-201ENST00000372276 TRIM21P19474 475 aaKnown RBP20.15■□□□□ 0.82
CD40-201ENST00000372276 CRKP46108 304 aa20.15■□□□□ 0.82
CD40-201ENST00000372276 CHMP4BP1P59074 171 aa20.15■□□□□ 0.82
CD40-201ENST00000372276 AP3B2Q13367 1082 aa20.15■□□□□ 0.82
CD40-201ENST00000372276 SNX29Q8TEQ0 813 aa20.15■□□□□ 0.82
CD40-201ENST00000372276 PNMA5Q96PV4 448 aa20.15■□□□□ 0.82
CD40-201ENST00000372276 TRIM34Q9BYJ4 488 aa20.15■□□□□ 0.82
CD40-201ENST00000372276 BLOC1S4Q9NUP1 217 aa20.15■□□□□ 0.82
CD40-201ENST00000372276 MYH4Q9Y623 1939 aa20.14■□□□□ 0.82
CD40-201ENST00000372276 ZRANB2O95218 330 aaKnown RBP eCLIP20.14■□□□□ 0.81
CD40-201ENST00000372276 ZSCAN20P17040 1043 aaPredicted RBP20.14■□□□□ 0.81
CD40-201ENST00000372276 TNNI2P48788 182 aa20.14■□□□□ 0.81
CD40-201ENST00000372276 SLFN12Q8IYM2 578 aa20.14■□□□□ 0.81
CD40-201ENST00000372276 KCTD17Q8N5Z5 321 aa20.14■□□□□ 0.81
CD40-201ENST00000372276 TSGA10Q9BZW7 698 aa20.14■□□□□ 0.81
CD40-201ENST00000372276 EIF3CLB5ME19 914 aaKnown RBP20.13■□□□□ 0.81
CD40-201ENST00000372276 F8W031 263 aaPredicted RBP20.13■□□□□ 0.81
CD40-201ENST00000372276 MPHOSPH10O00566 681 aaKnown RBP20.13■□□□□ 0.81
CD40-201ENST00000372276 KRT86O43790 486 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 COBLO75128 1261 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 STYK1Q6J9G0 422 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 AKT1S1Q96B36 256 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 EIF3CQ99613 913 aaKnown RBP20.13■□□□□ 0.81
CD40-201ENST00000372276 TTYH3Q9C0H2 523 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 ARFGAP3Q9NP61 516 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 PCDHA12Q9UN75 941 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 ATF5Q9Y2D1 282 aaPredicted RBP20.13■□□□□ 0.81
CD40-201ENST00000372276 CYP3A7-CYP3A51PA0A087WV96 503 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 CCDC151A5D8V7 595 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 MYMKA6NI61 221 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 B4DLN1 442 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 GNA14O95837 355 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 CYP3A7P24462 503 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 HNRNPH3P31942 346 aaKnown RBP20.13■□□□□ 0.81
CD40-201ENST00000372276 ARHGAP25P42331 645 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 MAN2A1Q16706 1144 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 LRRN4CLQ8ND94 238 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 ACRBPQ8NEB7 543 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 LRRC15Q8TF66 581 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 RPGRIP1Q96KN7 1286 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 SERPINA10Q9UK55 444 aa20.13■□□□□ 0.81
CD40-201ENST00000372276 PSMD14O00487 310 aa20.12■□□□□ 0.81
CD40-201ENST00000372276 TBX3O15119 743 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms