RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 RCSD1Q6JBY9 416 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 FMNL3Q8IVF7 1028 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 RAPGEF5Q92565 580 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 C15orf41Q9Y2V0 281 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 MPHOSPH10O00566 681 aaKnown RBP9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 MOCS3O95396 460 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 GOLGA8HP0CJ92 632 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 SLC8A3P57103 927 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 KCNJ2P63252 427 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 MKRN4PQ13434 485 aaPredicted RBP9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 ZCRB1Q8TBF4 217 aaKnown RBP9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 CCDC114Q96M63 670 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 GREM2Q9H772 168 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 GDAQ9Y2T3 454 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 RIPOR2Q9Y4F9 1068 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 AKAP11Q9UKA4 1901 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 TJP1Q07157 1748 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 SMIM23A6NLE4 172 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 SMAPO00193 183 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 PECAM1P16284 738 aaPredicted RBP9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 DRD4P21917 467 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 RDXP35241 583 aaKnown RBP9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 EPS15P42566 896 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 MTIF2P46199 727 aaKnown RBP9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 PIK3AP1Q6ZUJ8 805 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 MDM1Q8TC05 714 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 CDK5RAP3Q96JB5 506 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 PLCD4Q9BRC7 762 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 TLR10Q9BXR5 811 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 CCDC113Q9H0I3 377 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 HELLSQ9NRZ9 838 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 IRAK4Q9NWZ3 460 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 LRWD1Q9UFC0 647 aa9.68□□□□□ -0.86
SMARCA1-203ENST00000371123 KIAA0754O94854 1291 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 HPDP32754 393 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 IL15P40933 162 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 GYG1P46976 350 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 USP4Q13107 963 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 ALS2CLQ60I27 953 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 HEATR3Q7Z4Q2 680 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 CD302Q8IX05 232 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 CUL5Q93034 780 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 ATP6V1G3Q96LB4 118 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 OSBPL9Q96SU4 736 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 HAUS4Q9H6D7 363 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 TMBIM4Q9HC24 238 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 STIM2Q9P246 746 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 ARFGEF2Q9Y6D5 1785 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 SNUPNO95149 360 aaKnown RBP9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 TRIM21P19474 475 aaKnown RBP9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 ZNF662Q6ZS27 426 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 TMC4Q7Z404 712 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 CCDC51Q96ER9 411 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 TRIM47Q96LD4 638 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 YIPF3Q9GZM5 350 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 BABAM1Q9NWV8 329 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 SLC12A4Q9UP95 1085 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 SOS2Q07890 1332 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 SMIM22K7EJ46 135 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 DNAJC8O75937 253 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 ALADP13716 330 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 TNFRSF8P28908 595 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 IGHMBP2P38935 993 aaKnown RBP9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 EPHB4P54760 987 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 CDC37Q16543 378 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 FOXB2Q5VYV0 432 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 DZIP3Q86Y13 1208 aaKnown RBP9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 ZSCAN29Q8IWY8 852 aaPredicted RBP9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 IGDCC4Q8TDY8 1250 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 PICK1Q9NRD5 415 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 ANKIB1Q9P2G1 1089 aa9.67□□□□□ -0.86
SMARCA1-203ENST00000371123 SPDYE3A6NKU9 549 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 CDKL5O76039 1030 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 STARD3NLO95772 234 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 PRPF4BQ13523 1007 aaKnown RBP9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 ODF2Q5BJF6 829 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 APOA5Q6Q788 366 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 NOSTRINQ8IVI9 506 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 CNKSR2Q8WXI2 1034 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 HVCN1Q96D96 273 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 MTMR8Q96EF0 704 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 NHEJ1Q9H9Q4 299 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 SLC52A2Q9HAB3 445 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 ZMYND8Q9ULU4 1186 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 UBXN1Q04323 297 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 PICALMQ13492 652 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 ZKSCAN8Q15776 578 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 TCERG1LQ5VWI1 586 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 ERICH1Q86X53 443 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 DDX42Q86XP3 938 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 ANKLE1Q8NAG6 615 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 GPKOWQ92917 476 aaPredicted RBP eCLIP9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 ADAM7Q9H2U9 754 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 NIP7Q9Y221 180 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 KCNJ18B7U540 433 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 BHMG1C9JSJ3 638 aaPredicted RBP9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 ZNF844Q08AG5 666 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 KCNJ12Q14500 433 aa9.66□□□□□ -0.86
SMARCA1-203ENST00000371123 TTF1Q15361 905 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms