RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 RIPOR2Q9Y4F9 1068 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 COL5A2P05997 1499 aaPredicted RBP10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 STX10O60499 249 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 KIF4AO95239 1232 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 MMP10P09238 476 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 ERCC5P28715 1186 aaPredicted RBP10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 ABCB5Q2M3G0 1257 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 ANKRD42Q8N9B4 389 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 FBF1Q8TES7 1133 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 TMEM47Q9BQJ4 181 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 ISCA1Q9BUE6 129 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 PARD6BQ9BYG5 372 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 TDRD3Q9H7E2 651 aaKnown RBP10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 DNAJC17Q9NVM6 304 aaKnown RBP10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 PCDHA4Q9UN74 947 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 CTDNEP1O95476 244 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 FDPSP14324 419 aaKnown RBP10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 KLRK1P26718 216 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 CA8P35219 290 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 CEP85LQ5SZL2 805 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 PPP1R21Q6ZMI0 780 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 GLG1Q92896 1179 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 PICK1Q9NRD5 415 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 HDAC6Q9UBN7 1215 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 HYOU1Q9Y4L1 999 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 SRPRBQ9Y5M8 271 aaKnown RBP10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 XDHP47989 1333 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 ATRNO75882 1429 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 GOLGA8IPA6NC78 632 aa10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 GOLGA8JA6NMD2 632 aa10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 PTPREP23469 700 aa10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 NCBP1Q09161 790 aaKnown RBP10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 MKRN4PQ13434 485 aaPredicted RBP10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 CTTNQ14247 550 aaKnown RBP10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 MIER3Q7Z3K6 550 aa10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 ARHGEF1Q92888 912 aaKnown RBP10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 PDLIM2Q96JY6 352 aa10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 FAM84BQ96KN1 310 aaPredicted RBP10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 KRT12Q99456 494 aa10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 PLVAPQ9BX97 442 aa10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 STK32BQ9NY57 414 aa10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 ATF5Q9Y2D1 282 aaPredicted RBP10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 PTPN22Q9Y2R2 807 aa10.02□□□□□ -0.8
SMARCA1-202ENST00000371122 SMIM22K7EJ46 135 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 STAT1P42224 750 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 ANTXR2P58335 489 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 ZSCAN26Q16670 478 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 KRT26Q7Z3Y9 468 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 VSTM4Q8IW00 320 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 SMAP1Q8IYB5 467 aaPredicted RBP10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 METTL13Q8N6R0 699 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 CEP95Q96GE4 821 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 K7ENM7 598 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 C21orf2O43822 256 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 ATP2B4P23634 1241 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 EIF4A3P38919 411 aaKnown RBP10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 ARL1P40616 181 aaPredicted RBP10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 IGBP1P78318 339 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 TRIM14Q14142 442 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 LONRF2Q1L5Z9 754 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 BHMT2Q9H2M3 363 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 LRRC37A3O60309 1634 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 DDAH1O94760 285 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 PRCPP42785 496 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 IFNAR2P48551 515 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 SMTNP53814 917 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 MXRA7P84157 204 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 CFAP221Q4G0U5 840 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 MICALCLQ6ZW33 695 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 PNMA8AQ86V59 439 aaPredicted RBP10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 NUP58Q9BVL2 599 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 IQCGQ9H095 443 aaKnown RBP10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 FAN1Q9Y2M0 1017 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 TTLL3Q9Y4R7 772 aa10.02□□□□□ -0.81
SMARCA1-202ENST00000371122 DISP2A7MBM2 1401 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 E9PMD0 336 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 KRIT1O00522 736 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 NOP56O00567 594 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 CALUO43852 315 aaPredicted RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 TUBB4AP04350 444 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 MKRN3Q13064 507 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 MESDQ14696 234 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 NFIXQ14938 502 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 TXNRD1Q16881 649 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 WDR44Q5JSH3 913 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 SEL1L2Q5TEA6 688 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 KAZNQ674X7 775 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 TTBK2Q6IQ55 1244 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 DCUN1D2Q6PH85 259 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 CCDC121Q6ZUS5 278 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 SEPT12Q8IYM1 358 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 GPR161Q8N6U8 529 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 P2RX5Q93086 422 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 RASAL2Q9UJF2 1139 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 CDC23Q9UJX2 597 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 GFPT2O94808 682 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 GH2P01242 217 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 FCER1AP12319 257 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 STAT3P40763 770 aa10.01□□□□□ -0.81
SMARCA1-202ENST00000371122 OSTNP61366 133 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms