RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 H3BS24 57 aa7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 ATE1O95260 518 aa7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 CD96P40200 585 aa7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 TNNT2P45379 298 aaPredicted RBP7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 CRKP46108 304 aa7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 ZP2Q05996 745 aa7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 PIGBQ92521 554 aa7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 SMARCC1Q92922 1105 aaPredicted RBP7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 HSPA12BQ96MM6 686 aa7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 TRIT1Q9H3H1 467 aaKnown RBP7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 UBP1Q9NZI7 540 aa7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 LMCD1Q9NZU5 365 aa7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 KCNH3Q9ULD8 1083 aa7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 ST14Q9Y5Y6 855 aa7.1□□□□□ -1.27
RNU4-4P-201ENST00000364588 ITGB5P18084 799 aa7.09□□□□□ -1.27
RNU4-4P-201ENST00000364588 ZNF165P49910 485 aa7.09□□□□□ -1.27
RNU4-4P-201ENST00000364588 TNK2Q07912 1038 aa7.09□□□□□ -1.27
RNU4-4P-201ENST00000364588 SEZ6Q53EL9 994 aa7.09□□□□□ -1.27
RNU4-4P-201ENST00000364588 FLAD1Q8NFF5 587 aa7.09□□□□□ -1.27
RNU4-4P-201ENST00000364588 PPP1R13LQ8WUF5 828 aa7.09□□□□□ -1.27
RNU4-4P-201ENST00000364588 EHMT1Q9H9B1 1298 aa7.09□□□□□ -1.27
RNU4-4P-201ENST00000364588 SEMA3GQ9NS98 782 aa7.09□□□□□ -1.27
RNU4-4P-201ENST00000364588 NCAPD2Q15021 1401 aa7.09□□□□□ -1.28
RNU4-4P-201ENST00000364588 WASHC2AQ641Q2 1341 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 CNTNAP4Q9C0A0 1308 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 UPK3BL1B0FP48 263 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 UPK3BL2E5RIL1 263 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 RNASE1P07998 156 aaKnown RBP7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 RAG1P15918 1043 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 RNF4P78317 190 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 LRRFIP1Q32MZ4 808 aaKnown RBP7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 TMPRSS7Q7RTY8 843 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 LINC00116Q8NCU8 138 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 NKD1Q969G9 470 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 ATP13A1Q9HD20 1204 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 MBNL3Q9NUK0 354 aaKnown RBP7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 TMOD3Q9NYL9 352 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 POLKQ9UBT6 870 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 ASAP1Q9ULH1 1129 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 CD2APQ9Y5K6 639 aa7.08□□□□□ -1.28
RNU4-4P-201ENST00000364588 IGSF1Q8N6C5 1336 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 CHURC1-FNTBB4DL54 471 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 DNAJA2O60884 412 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 PHKG2P15735 406 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 MCM4P33991 863 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 ITPK1Q13572 414 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 EIF4A2Q14240 407 aaKnown RBP7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 OVOS1Q6IE37 1185 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 ATG4DQ86TL0 474 aaPredicted RBP7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 SLITRK4Q8IW52 837 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 DTWD2Q8NBA8 298 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 ZNF526Q8TF50 670 aaPredicted RBP7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 MRRFQ96E11 262 aaKnown RBP7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 ASIC4Q96FT7 647 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 CCDC120Q96HB5 630 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 KREMEN1Q96MU8 473 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 PCGF6Q9BYE7 350 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 GPATCH2Q9NW75 528 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 ADAMTS6Q9UKP5 1117 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 ATP10DQ9P241 1426 aa7.07□□□□□ -1.28
RNU4-4P-201ENST00000364588 MEIS3P2A8K0S8 358 aa7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 RGS13O14921 159 aa7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 IMPDH2P12268 514 aa7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 HMGB2P26583 209 aaKnown RBP7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 GBP1P32455 592 aa7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 ARSHQ5FYA8 562 aa7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 GK5Q6ZS86 529 aa7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 IFNL2Q8IZJ0 200 aa7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 LRRN4CLQ8ND94 238 aa7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 TMEM40Q8WWA1 233 aa7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 Q96M66 194 aa7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 CARS2Q9HA77 564 aaKnown RBP7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 PCDHGB7Q9Y5F8 929 aa7.06□□□□□ -1.28
RNU4-4P-201ENST00000364588 SLC22A31A6NKX4 558 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 CCNFP41002 786 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 RAD51AP2Q09MP3 1159 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 ZNF394Q53GI3 561 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 CDCP2Q5VXM1 449 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 NLRC3Q7RTR2 1065 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 ZNF654Q8IZM8 581 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 RGS22Q8NE09 1264 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 BAHD1Q8TBE0 780 aaPredicted RBP7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 UBE2FQ969M7 185 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 SPATA32Q96LK8 384 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 KIF2CQ99661 725 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 GPR62Q9BZJ7 368 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 ZSWIM5Q9P217 1185 aa7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 DDX41Q9UJV9 622 aaKnown RBP7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 N4BP2Q86UW6 1770 aaPredicted RBP7.05□□□□□ -1.28
RNU4-4P-201ENST00000364588 PAPLNO95428 1278 aa7.04□□□□□ -1.28
RNU4-4P-201ENST00000364588 MMP10P09238 476 aa7.04□□□□□ -1.28
RNU4-4P-201ENST00000364588 EAF1Q96JC9 268 aaPredicted RBP7.04□□□□□ -1.28
RNU4-4P-201ENST00000364588 CNNM2Q9H8M5 875 aa7.04□□□□□ -1.28
RNU4-4P-201ENST00000364588 PANK3Q9H999 370 aa7.04□□□□□ -1.28
RNU4-4P-201ENST00000364588 ZNRF3Q9ULT6 936 aa7.04□□□□□ -1.28
RNU4-4P-201ENST00000364588 RNF114Q9Y508 228 aa7.04□□□□□ -1.28
RNU4-4P-201ENST00000364588 ADCY9O60503 1353 aa7.04□□□□□ -1.28
RNU4-4P-201ENST00000364588 KDRP35968 1356 aa7.04□□□□□ -1.28
RNU4-4P-201ENST00000364588 COL5A3P25940 1745 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms