RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 AMPD3Q01432 767 aa17.32■□□□□ 0.36
CNKSR1-201ENST00000361530 CNNM4Q6P4Q7 775 aa17.32■□□□□ 0.36
CNKSR1-201ENST00000361530 GPIHBP1Q8IV16 184 aa17.32■□□□□ 0.36
CNKSR1-201ENST00000361530 CALML4Q96GE6 196 aa17.32■□□□□ 0.36
CNKSR1-201ENST00000361530 NUDT12Q9BQG2 462 aa17.32■□□□□ 0.36
CNKSR1-201ENST00000361530 GBP3Q9H0R5 595 aa17.32■□□□□ 0.36
CNKSR1-201ENST00000361530 UFL1O94874 794 aa17.32■□□□□ 0.36
CNKSR1-201ENST00000361530 TDP2O95551 362 aa17.32■□□□□ 0.36
CNKSR1-201ENST00000361530 SV2BQ7L1I2 683 aa17.32■□□□□ 0.36
CNKSR1-201ENST00000361530 LRWD1Q9UFC0 647 aa17.32■□□□□ 0.36
CNKSR1-201ENST00000361530 ERCC3P19447 782 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 SLC20A2Q08357 652 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 C10orf67Q8IYJ2 551 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 CNBD1Q8NA66 436 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 SMCR8Q8TEV9 937 aaPredicted RBP17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 PURBQ96QR8 312 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 RIOX1Q9H6W3 641 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 CWC15Q9P013 229 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 KCNG1Q9UIX4 513 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 CDK5RAP2Q96SN8 1893 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 PHACTR2O75167 634 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 ZMYND10O75800 440 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 EIF3JO75822 258 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 TUBBP07437 444 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 TNNT3P45378 269 aaPredicted RBP17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 CALCRLQ16602 461 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 FIGNQ5HY92 759 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 C15orf52Q6ZUT6 534 aaKnown RBP17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 GLIS3Q8NEA6 775 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 FAM207AQ9NSI2 230 aaPredicted RBP17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 PSD3Q9NYI0 1048 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 ARHGAP20Q9P2F6 1191 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 SIK3Q9Y2K2 1263 aa17.31■□□□□ 0.36
CNKSR1-201ENST00000361530 A0A1W2PQJ5 194 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 POTEMA6NI47 508 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 IPO7O95373 1038 aaKnown RBP17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 PDHBP11177 359 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 SMARCA1P28370 1054 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 NOVP48745 357 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 COBLL1Q53SF7 1204 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 FKBP15Q5T1M5 1219 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 KCNK18Q7Z418 384 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 CLEC10AQ8IUN9 316 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 CDK17Q00537 523 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 VWA3BQ502W6 1294 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 MFSD14BQ5SR56 506 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 EHBP1Q8NDI1 1231 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 CCDC102AQ96A19 550 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 CCDC42Q96M95 316 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 NDST4Q9H3R1 872 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 LCMT1Q9UIC8 334 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 PLAGL2Q9UPG8 496 aa17.3■□□□□ 0.36
CNKSR1-201ENST00000361530 ESYT2A0FGR8 921 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 TRIM66O15016 1216 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 PPP1R2P41236 205 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 VAV2P52735 878 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 TRAPPC3LQ5T215 181 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 C2CD5Q86YS7 1000 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 LRRC47Q8N1G4 583 aaKnown RBP17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 LARP4BQ92615 738 aaKnown RBP17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 C8orf37Q96NL8 207 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 IDEP14735 1019 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 IL1R1P14778 569 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 KIF5AQ12840 1032 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 LRRC41Q15345 812 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 PRR5LQ6MZQ0 368 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 UNC13DQ70J99 1090 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 GOLGA5Q8TBA6 731 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 GDAP1L1Q96MZ0 367 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 JADE2Q9NQC1 790 aa17.29■□□□□ 0.36
CNKSR1-201ENST00000361530 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 ATP2B2Q01814 1243 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 GJA10Q969M2 543 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 HINFPQ9BQA5 517 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 RASSF4Q9H2L5 321 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 CAPN6Q9Y6Q1 641 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 BTAF1O14981 1849 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 MYBL2P10244 700 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 HNRNPH3P31942 346 aaKnown RBP17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 ECM1Q16610 540 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 CCDC96Q2M329 555 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 FAM196AQ6ZSG2 479 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 MMRN2Q9H8L6 949 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 MLXIPQ9HAP2 919 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 GPCPD1Q9NPB8 672 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 MTMR4Q9NYA4 1195 aa17.28■□□□□ 0.36
CNKSR1-201ENST00000361530 PVALEFA0A1B0GWK0 134 aa17.27■□□□□ 0.36
CNKSR1-201ENST00000361530 MYO1CO00159 1063 aa17.27■□□□□ 0.36
CNKSR1-201ENST00000361530 SPA17Q15506 151 aa17.27■□□□□ 0.36
CNKSR1-201ENST00000361530 VPS72Q15906 364 aa17.27■□□□□ 0.36
CNKSR1-201ENST00000361530 LEKR1Q6ZMV7 388 aa17.27■□□□□ 0.36
CNKSR1-201ENST00000361530 GSPT2Q8IYD1 628 aaKnown RBP17.27■□□□□ 0.36
CNKSR1-201ENST00000361530 RPGRQ92834 1020 aaKnown RBP17.27■□□□□ 0.36
CNKSR1-201ENST00000361530 FAM163AQ96GL9 167 aaPredicted RBP17.27■□□□□ 0.36
CNKSR1-201ENST00000361530 NGLY1Q96IV0 654 aa17.27■□□□□ 0.36
CNKSR1-201ENST00000361530 STK17AQ9UEE5 414 aa17.27■□□□□ 0.36
CNKSR1-201ENST00000361530 PCDHA13Q9Y5I0 950 aa17.27■□□□□ 0.36
CNKSR1-201ENST00000361530 ANO9A1A5B4 782 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms