RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 CASC4Q6P4E1 433 aa22.5■■□□□ 1.19
NCKAP1-201ENST00000360982 LRFN2Q9ULH4 789 aa22.5■■□□□ 1.19
NCKAP1-201ENST00000360982 RIPOR2Q9Y4F9 1068 aa22.5■■□□□ 1.19
NCKAP1-201ENST00000360982 BUB1BO60566 1050 aaPredicted RBP22.5■■□□□ 1.19
NCKAP1-201ENST00000360982 SPATA1Q5VX52 437 aa22.5■■□□□ 1.19
NCKAP1-201ENST00000360982 RPAINQ86UA6 219 aa22.5■■□□□ 1.19
NCKAP1-201ENST00000360982 CEP170P1Q96L14 293 aa22.5■■□□□ 1.19
NCKAP1-201ENST00000360982 PPP2R5DQ14738 602 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 HLFQ16534 295 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 PUS7LQ9H0K6 701 aaKnown RBP22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 PLA2R1Q13018 1463 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 CD2BP2O95400 341 aaKnown RBP22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 SESTD1Q86VW0 696 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 TBCKQ8TEA7 893 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 FAM81BQ96LP2 452 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 PSDA5PKW4 1024 aaPredicted RBP22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 PTK2Q05397 1052 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 TXNRD1Q16881 649 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 RUFY4Q6ZNE9 571 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 RAB20Q9NX57 234 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 CHD1O14646 1710 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 STAM2O75886 525 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 HOXA7P31268 230 aaPredicted RBP22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 SLC12A2P55011 1212 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 KRT81Q14533 505 aa22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 RC3H1Q5TC82 1133 aaKnown RBP22.49■■□□□ 1.19
NCKAP1-201ENST00000360982 ATP8B1O43520 1251 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 PPP6R2O75170 966 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 OATP04181 439 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 ZSCAN20P17040 1043 aaPredicted RBP22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 PAK2Q13177 524 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 RASEFQ8IZ41 740 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 NT5C1BQ96P26 610 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 XPO4Q9C0E2 1151 aaKnown RBP22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 CDHR2Q9BYE9 1310 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 HPDP32754 393 aaPredicted RBP22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 UBXN2AP68543 259 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 IRX5P78411 483 aaPredicted RBP22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 TRIM31Q9BZY9 425 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 PARP2Q9UGN5 583 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 H2AFZP0C0S5 128 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 PTPREP23469 700 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 H2AFVQ71UI9 128 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 ZNF589Q86UQ0 364 aaPredicted RBP22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 TRIM58Q8NG06 486 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 MRFAP1L1Q96HT8 127 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 RPGRIP1Q96KN7 1286 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 PPFIA1Q13136 1202 aa22.48■■□□□ 1.19
NCKAP1-201ENST00000360982 PRPF3O43395 683 aaKnown RBP22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 MYL1P05976 194 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 CRKP46108 304 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 SCYL2Q6P3W7 929 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 CACTINQ8WUQ7 758 aaKnown RBP22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 KMT5AQ9NQR1 393 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 CPSF1Q10570 1443 aaKnown RBP22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 USP17L2Q6R6M4 530 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 ACCSQ96QU6 501 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 DDX23Q9BUQ8 820 aaKnown RBP22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 ZNF341Q9BYN7 854 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 RAB17Q9H0T7 212 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 CD209Q9NNX6 404 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 NRBP1Q9UHY1 535 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 CABS1Q96KC9 395 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 DNAJC5Q9H3Z4 198 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 PPANQ9NQ55 473 aaKnown RBP22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 PNMA6FA0A0J9YX94 578 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 SH2B2O14492 632 aaPredicted RBP22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 METTL23Q86XA0 190 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 ARHGEF1Q92888 912 aaKnown RBP22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 ANKRD36BP1Q96IX9 119 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 TMEM206Q9H813 350 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 DDX41Q9UJV9 622 aaKnown RBP22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 MINPP1Q9UNW1 487 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 TET3O43151 1660 aa22.47■■□□□ 1.19
NCKAP1-201ENST00000360982 ABCB4P21439 1286 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 GCKP35557 465 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 NSFP46459 744 aaKnown RBP22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 CDC37Q16543 378 aaPredicted RBP22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 EXOC3L4Q17RC7 722 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 ADCK5Q3MIX3 580 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 DYNLL2Q96FJ2 89 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 PIH1D3Q9NQM4 214 aaKnown RBP22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 ZSWIM5Q9P217 1185 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 SASH1O94885 1247 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 APOL6Q9BWW8 343 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 RIC8AQ9NPQ8 531 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 HOXC10Q9NYD6 342 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 PTCH1Q13635 1447 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 PSAPP07602 524 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 SPATA24Q86W54 205 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 RSAD2Q8WXG1 361 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 IFT122Q9HBG6 1241 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 POLR3EQ9NVU0 708 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 AXIN2Q9Y2T1 843 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 CYP19A1P11511 503 aaPredicted RBP22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 KLHL7Q8IXQ5 586 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 CLIC6Q96NY7 704 aa22.46■■□□□ 1.19
NCKAP1-201ENST00000360982 ABCC12Q96J65 1359 aa22.45■■□□□ 1.19
NCKAP1-201ENST00000360982 ZBTB7AO95365 584 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms