RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 BTG4Q9NY30 223 aa17.43■□□□□ 0.38
COL18A1-203ENST00000359759 TNRQ92752 1358 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 ZBTB24O43167 697 aaPredicted RBP17.42■□□□□ 0.38
COL18A1-203ENST00000359759 LRRN2O75325 713 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 HDLBPQ00341 1268 aaKnown RBP17.42■□□□□ 0.38
COL18A1-203ENST00000359759 HIPK4Q8NE63 616 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 IWS1Q96ST2 819 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 DRC3Q9H069 523 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 DNAJC17Q9NVM6 304 aaKnown RBP17.42■□□□□ 0.38
COL18A1-203ENST00000359759 CTNND1O60716 968 aaKnown RBP17.42■□□□□ 0.38
COL18A1-203ENST00000359759 UBXN2AP68543 259 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 PPP2R5BQ15173 497 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 MROH5Q6ZUA9 1318 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 YTHDC2Q9H6S0 1430 aaKnown RBP17.42■□□□□ 0.38
COL18A1-203ENST00000359759 EVI5O60447 810 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 LRRC41Q15345 812 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 NEK8Q86SG6 692 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 SMCR8Q8TEV9 937 aaPredicted RBP17.42■□□□□ 0.38
COL18A1-203ENST00000359759 FAM193BQ96PV7 902 aaPredicted RBP17.42■□□□□ 0.38
COL18A1-203ENST00000359759 NPATQ14207 1427 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 TEKT3Q9BXF9 490 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 POLR2MP0CAP2 368 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 PLS3P13797 630 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 PTGDRQ13258 359 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 PARP10Q53GL7 1025 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 CDC23Q9UJX2 597 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 PALD1Q9ULE6 856 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 SUFUQ9UMX1 484 aa17.42■□□□□ 0.38
COL18A1-203ENST00000359759 BASP1P80723 227 aaKnown RBP17.41■□□□□ 0.38
COL18A1-203ENST00000359759 NNTQ13423 1086 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 HABP4Q5JVS0 413 aaKnown RBP17.41■□□□□ 0.38
COL18A1-203ENST00000359759 ACRBPQ8NEB7 543 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 DEPDC1BQ8WUY9 529 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 SPZ1Q9BXG8 430 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 ARPP21Q9UBL0 812 aaPredicted RBP17.41■□□□□ 0.38
COL18A1-203ENST00000359759 A0A1W2PP64 1363 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 KIAA0586Q9BVV6 1533 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 BTBD18B2RXH4 712 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 TCP10L2B9ZVM9 353 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 LRRC23Q53EV4 343 aaPredicted RBP17.41■□□□□ 0.38
COL18A1-203ENST00000359759 NBPF3Q9H094 633 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 SOWAHDA6NJG2 315 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 TUBGCP2Q9BSJ2 902 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 DAAM1Q9Y4D1 1078 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 GOLGA8SH3BPF8 625 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 GCP02774 474 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 KRT1P04264 644 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 CMA1P23946 247 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 GTF2IP78347 998 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 CARD14Q9BXL6 1004 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 EPHB4P54760 987 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 NUDCD3Q8IVD9 361 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 GRAMD1CQ8IYS0 662 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 DNAAF3Q8N9W5 541 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 PCIF1Q9H4Z3 704 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 NOVA2Q9UNW9 492 aaKnown RBP17.41■□□□□ 0.38
COL18A1-203ENST00000359759 MTMR6Q9Y217 621 aa17.41■□□□□ 0.38
COL18A1-203ENST00000359759 NPR1P16066 1061 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 APBA1Q02410 837 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 PLA2G4DQ86XP0 818 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 EXT2Q93063 718 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 ALKBH8Q96BT7 664 aaKnown RBP17.4■□□□□ 0.38
COL18A1-203ENST00000359759 KIAA1024Q9UPX6 916 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 MFAP3P55082 362 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 GCKRQ14397 625 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 CEP70Q8NHQ1 597 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 SYF2O95926 243 aaKnown RBP17.4■□□□□ 0.38
COL18A1-203ENST00000359759 GNPTABQ3T906 1256 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 EAPPQ56P03 285 aaPredicted RBP17.4■□□□□ 0.38
COL18A1-203ENST00000359759 DARS2Q6PI48 645 aaKnown RBP17.4■□□□□ 0.38
COL18A1-203ENST00000359759 IFNL3Q8IZI9 196 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 RABGGTAQ92696 567 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 ZNF274Q96GC6 653 aaPredicted RBP17.4■□□□□ 0.38
COL18A1-203ENST00000359759 IRAK4Q9NWZ3 460 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 SUCLA2Q9P2R7 463 aaPredicted RBP17.4■□□□□ 0.38
COL18A1-203ENST00000359759 SEPT9Q9UHD8 586 aaPredicted RBP17.4■□□□□ 0.38
COL18A1-203ENST00000359759 KDM5BQ9UGL1 1544 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 CLIC2O15247 247 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 SCNN1DP51172 638 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 MRPS25P82663 173 aaKnown RBP17.4■□□□□ 0.38
COL18A1-203ENST00000359759 GADL1Q6ZQY3 521 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 ADPGKQ9BRR6 497 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 AP1M1Q9BXS5 423 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 PSDA5PKW4 1024 aaPredicted RBP17.4■□□□□ 0.38
COL18A1-203ENST00000359759 GSPT1P15170 499 aaKnown RBP17.4■□□□□ 0.38
COL18A1-203ENST00000359759 GUCY2CP25092 1073 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 SPOPLQ6IQ16 392 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 CAPN11Q9UMQ6 739 aa17.4■□□□□ 0.38
COL18A1-203ENST00000359759 GOLGA8QA0A0J9YX86 632 aa17.39■□□□□ 0.38
COL18A1-203ENST00000359759 GOLGA8OA6NCC3 632 aa17.39■□□□□ 0.38
COL18A1-203ENST00000359759 GOLGA8CPA6NN73 597 aa17.39■□□□□ 0.38
COL18A1-203ENST00000359759 GOLGA8NF8WBI6 632 aa17.39■□□□□ 0.38
COL18A1-203ENST00000359759 MYO1FO00160 1098 aa17.39■□□□□ 0.38
COL18A1-203ENST00000359759 PTK2Q05397 1052 aa17.39■□□□□ 0.38
COL18A1-203ENST00000359759 FAM133AQ8N9E0 248 aa17.39■□□□□ 0.38
COL18A1-203ENST00000359759 RUNDC3BQ96NL0 473 aa17.39■□□□□ 0.38
COL18A1-203ENST00000359759 DHX9Q08211 1270 aaKnown RBP17.39■□□□□ 0.37
COL18A1-203ENST00000359759 SPDYE1Q8NFV5 336 aaPredicted RBP17.39■□□□□ 0.37
COL18A1-203ENST00000359759 MRFAP1Q9Y605 127 aa17.39■□□□□ 0.37
COL18A1-203ENST00000359759 SCINQ9Y6U3 715 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms