RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 EEPD1Q7L9B9 569 aa20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 ZNF467Q7Z7K2 595 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 TRMT44Q8IYL2 757 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 NSUN6Q8TEA1 469 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 ZFP91Q96JP5 570 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 PXMP2Q9NR77 195 aa20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 MAP3K20Q9NYL2 800 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 ESYT2A0FGR8 921 aa20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 HMGN5P82970 282 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 NPY5RQ15761 445 aa20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 MAMDC4Q6UXC1 1216 aa20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 SAMD3Q8N6K7 520 aa20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 FAM184AQ8NB25 1140 aa20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 DNERQ8NFT8 737 aa20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 IL31RAQ8NI17 732 aa20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 MAF1Q9H063 256 aa20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-202ENST00000355841 GJB2P29033 226 aa20.5■□□□□ 0.87
PDLIM7-202ENST00000355841 GNA11P29992 359 aa20.5■□□□□ 0.87
PDLIM7-202ENST00000355841 MTFR1Q15390 333 aa20.5■□□□□ 0.87
PDLIM7-202ENST00000355841 TRPV1Q8NER1 839 aa20.5■□□□□ 0.87
PDLIM7-202ENST00000355841 PHF20Q9BVI0 1012 aa20.5■□□□□ 0.87
PDLIM7-202ENST00000355841 PCDHA6Q9UN73 950 aa20.5■□□□□ 0.87
PDLIM7-202ENST00000355841 SMC3Q9UQE7 1217 aa20.5■□□□□ 0.87
PDLIM7-202ENST00000355841 PCDHA8Q9Y5H6 950 aa20.5■□□□□ 0.87
PDLIM7-202ENST00000355841 ASB14A6NK59 587 aa20.49■□□□□ 0.87
PDLIM7-202ENST00000355841 XBP1P17861 261 aa20.49■□□□□ 0.87
PDLIM7-202ENST00000355841 CCND3P30281 292 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-202ENST00000355841 CLK2P49760 499 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-202ENST00000355841 REXO1Q8N1G1 1221 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-202ENST00000355841 PDCD2LQ9BRP1 358 aa20.49■□□□□ 0.87
PDLIM7-202ENST00000355841 PCDHA4Q9UN74 947 aa20.49■□□□□ 0.87
PDLIM7-202ENST00000355841 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-202ENST00000355841 SYNGAP1Q96PV0 1343 aa20.49■□□□□ 0.87
PDLIM7-202ENST00000355841 SPDYE3A6NKU9 549 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 MYCLP12524 364 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 PDE4DQ08499 809 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 PGM5Q15124 567 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 KRT40Q6A162 431 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 FBXO16Q8IX29 292 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 OXER1Q8TDS5 423 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 ZNF333Q96JL9 665 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 UNC93B1Q9H1C4 597 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 MCM3APO60318 1980 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 NR3C2P08235 984 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 EDNRBP24530 442 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 MAP3K21Q5TCX8 1036 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 BLIDQ8IZY5 108 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 MSL3Q8N5Y2 521 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 SPRYD3Q8NCJ5 442 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 ARMC5Q96C12 935 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 C8orf76Q96K31 380 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 GLT8D2Q9H1C3 349 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 ZHX1Q9UKY1 873 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 CNPY2Q9Y2B0 182 aa20.48■□□□□ 0.87
PDLIM7-202ENST00000355841 CNGA1P29973 690 aa20.47■□□□□ 0.87
PDLIM7-202ENST00000355841 TRIM29Q14134 588 aa20.47■□□□□ 0.87
PDLIM7-202ENST00000355841 MORC4Q8TE76 937 aa20.47■□□□□ 0.87
PDLIM7-202ENST00000355841 ANO3Q9BYT9 981 aa20.47■□□□□ 0.87
PDLIM7-202ENST00000355841 PDGFCQ9NRA1 345 aa20.47■□□□□ 0.87
PDLIM7-202ENST00000355841 RPTORQ8N122 1335 aa20.47■□□□□ 0.87
PDLIM7-202ENST00000355841 ZNF865P0CJ78 1059 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-202ENST00000355841 CYBAP13498 195 aa20.46■□□□□ 0.87
PDLIM7-202ENST00000355841 ACVR2BQ13705 512 aa20.46■□□□□ 0.87
PDLIM7-202ENST00000355841 TNS4Q8IZW8 715 aa20.46■□□□□ 0.87
PDLIM7-202ENST00000355841 BICD2Q8TD16 824 aa20.46■□□□□ 0.87
PDLIM7-202ENST00000355841 IWS1Q96ST2 819 aa20.46■□□□□ 0.87
PDLIM7-202ENST00000355841 KATNBL1Q9H079 304 aa20.46■□□□□ 0.87
PDLIM7-202ENST00000355841 MMP1P03956 469 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 CCL5P13501 91 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 ANO1Q5XXA6 986 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 DAGLBQ8NCG7 672 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 RTEL1Q9NZ71 1219 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 FRMPD4Q14CM0 1322 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 M0R2N6 131 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 PTGS1P23219 599 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 MRPS9P82933 396 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 NR5A1Q13285 461 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 AP3B2Q13367 1082 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 STXBP2Q15833 593 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 TMEM63BQ5T3F8 832 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 VSIG10LQ86VR7 867 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 LENG1Q96BZ8 264 aaPredicted RBP20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 MPHOSPH6Q99547 160 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 RNF208Q9H0X6 261 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 ABHD16BQ9H3Z7 469 aa20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 HMX1Q9NP08 348 aaPredicted RBP20.45■□□□□ 0.86
PDLIM7-202ENST00000355841 BTBD18B2RXH4 712 aa20.44■□□□□ 0.86
PDLIM7-202ENST00000355841 FOSP01100 380 aaPredicted RBP20.44■□□□□ 0.86
PDLIM7-202ENST00000355841 CCND2P30279 289 aa20.44■□□□□ 0.86
PDLIM7-202ENST00000355841 GALNT17Q6IS24 598 aa20.44■□□□□ 0.86
PDLIM7-202ENST00000355841 SEPT14Q6ZU15 432 aa20.44■□□□□ 0.86
PDLIM7-202ENST00000355841 FAM177A1Q8N128 213 aaPredicted RBP20.44■□□□□ 0.86
PDLIM7-202ENST00000355841 FBXO18Q8NFZ0 1043 aa20.44■□□□□ 0.86
PDLIM7-202ENST00000355841 INTS4Q96HW7 963 aaKnown RBP20.44■□□□□ 0.86
PDLIM7-202ENST00000355841 ABHD8Q96I13 439 aa20.44■□□□□ 0.86
PDLIM7-202ENST00000355841 B4DLN1 442 aa20.43■□□□□ 0.86
PDLIM7-202ENST00000355841 ADCY6O43306 1168 aa20.43■□□□□ 0.86
PDLIM7-202ENST00000355841 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-202ENST00000355841 KRT2P35908 639 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms