RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 BMS1Q14692 1282 aaKnown RBP6.46□□□□□ -1.38
CD47-201ENST00000355354 ARHGAP29Q52LW3 1261 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 GJB7Q6PEY0 223 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 MIGA2Q7L4E1 593 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 DHX32Q7L7V1 743 aaKnown RBP6.46□□□□□ -1.38
CD47-201ENST00000355354 ARMC5Q96C12 935 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 MMS19Q96T76 1030 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 VPS16Q9H269 839 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 ICE1Q9Y2F5 2266 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 FGFR1P11362 822 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 PGGT1BP53609 377 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 EVCP57679 992 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 RNASELQ05823 741 aaKnown RBP6.46□□□□□ -1.38
CD47-201ENST00000355354 PACS2Q86VP3 889 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 RBM17Q96I25 401 aaKnown RBP6.46□□□□□ -1.38
CD47-201ENST00000355354 DUSP9Q99956 384 aaKnown RBP6.46□□□□□ -1.38
CD47-201ENST00000355354 MCOLN1Q9GZU1 580 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 CABP5Q9NP86 173 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 TRIP12Q14669 1992 aaPredicted RBP6.46□□□□□ -1.38
CD47-201ENST00000355354 EYA2O00167 538 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 ZNF174Q15697 407 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 CCDC96Q2M329 555 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 CYP4F22Q6NT55 531 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 FAM228AQ86W67 206 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 CCDC191Q8NCU4 936 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 MRIQ9BWK5 157 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 PARD6BQ9BYG5 372 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 RALGAPA2Q2PPJ7 1873 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 TTC26A0AVF1 554 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 GOLGA8BA8MQT2 603 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 USP17L12C9JPN9 530 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 USP17L21D6R901 530 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 BMP1P13497 986 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 CASP14P31944 242 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 PBX1P40424 430 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 TBX2Q13207 712 aaPredicted RBP6.45□□□□□ -1.38
CD47-201ENST00000355354 DEFB115Q30KQ5 88 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 MCMDC2Q4G0Z9 681 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 USP17L2Q6R6M4 530 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 ATG14Q6ZNE5 492 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 MAGEB6Q8N7X4 407 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 C12orf65Q9H3J6 166 aaKnown RBP6.45□□□□□ -1.38
CD47-201ENST00000355354 MKRN1Q9UHC7 482 aaKnown RBP6.45□□□□□ -1.38
CD47-201ENST00000355354 MINPP1Q9UNW1 487 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 UBR5O95071 2799 aaPredicted RBP6.45□□□□□ -1.38
CD47-201ENST00000355354 SH3TC1Q8TE82 1336 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 NBPF19A0A087WUL8 3843 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 PPP1R3GB7ZBB8 358 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 CA12O43570 354 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 KLRC4O43908 158 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 SARSP49591 514 aaKnown RBP6.45□□□□□ -1.38
CD47-201ENST00000355354 SEC24CP53992 1094 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 MAP2K1Q02750 393 aaPredicted RBP6.45□□□□□ -1.38
CD47-201ENST00000355354 RSBN1LQ6PCB5 846 aaPredicted RBP6.45□□□□□ -1.38
CD47-201ENST00000355354 CTR9Q6PD62 1173 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 BBXQ8WY36 941 aaPredicted RBP6.45□□□□□ -1.38
CD47-201ENST00000355354 ABCA1O95477 2261 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 TCRBV7S2A1N4TA0A589 114 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 MINDY4BA8MYZ0 360 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 OPLAHO14841 1288 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 RHOXF2BP0C7M4 288 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 RHOXF2Q9BQY4 288 aa6.45□□□□□ -1.38
CD47-201ENST00000355354 CCDC94Q9BW85 323 aaPredicted RBP6.45□□□□□ -1.38
CD47-201ENST00000355354 PPP1R37O75864 691 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 IFIT1P09914 478 aaKnown RBP6.44□□□□□ -1.38
CD47-201ENST00000355354 SASS6Q6UVJ0 657 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 PDCL2Q8N4E4 241 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 SPATA20Q8TB22 786 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 MAN1B1Q9UKM7 699 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 KIF3AQ9Y496 699 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 V9GY48 417 aaPredicted RBP6.44□□□□□ -1.38
CD47-201ENST00000355354 PDS5AQ29RF7 1337 aaKnown RBP6.44□□□□□ -1.38
CD47-201ENST00000355354 ECE2O60344 883 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 KCNJ4P48050 445 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 FANCCQ00597 558 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 ZRSR1Q15695 479 aaKnown RBP6.44□□□□□ -1.38
CD47-201ENST00000355354 WASHC4Q2M389 1173 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 WNK4Q96J92 1243 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 FAM84BQ96KN1 310 aaPredicted RBP6.44□□□□□ -1.38
CD47-201ENST00000355354 GGT7Q9UJ14 662 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 MYO18BQ8IUG5 2567 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 MYOFQ9NZM1 2061 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 ATP1A1P05023 1023 aaKnown RBP6.44□□□□□ -1.38
CD47-201ENST00000355354 EML3Q32P44 896 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 DIS3L2Q8IYB7 885 aaKnown RBP6.44□□□□□ -1.38
CD47-201ENST00000355354 ZBTB12Q9Y330 459 aaPredicted RBP6.44□□□□□ -1.38
CD47-201ENST00000355354 IGSF9BQ9UPX0 1349 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 CFAP46Q8IYW2 2715 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 NLRC5Q86WI3 1866 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 RSPH10B2B2RC85 870 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 SH2B2O14492 632 aaPredicted RBP6.44□□□□□ -1.38
CD47-201ENST00000355354 AFPP02771 609 aaKnown RBP6.44□□□□□ -1.38
CD47-201ENST00000355354 RSPH10BP0C881 870 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 RBL2Q08999 1139 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 MCM6Q14566 821 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 TTC5Q8N0Z6 440 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 KIAA0895Q8NCT3 520 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 CXCL16Q9H2A7 254 aa6.44□□□□□ -1.38
CD47-201ENST00000355354 BMP2KQ9NSY1 1161 aaPredicted RBP6.44□□□□□ -1.38
CD47-201ENST00000355354 CKAP5Q14008 2032 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms