RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SCFD2Q8WU76 684 aa22.11■■□□□ 1.13
SYNE4-202ENST00000340477 SENP6Q9GZR1 1112 aaPredicted RBP22.11■■□□□ 1.13
SYNE4-202ENST00000340477 PXMP2Q9NR77 195 aa22.11■■□□□ 1.13
SYNE4-202ENST00000340477 COL20A1Q9P218 1284 aa22.11■■□□□ 1.13
SYNE4-202ENST00000340477 DDX49Q9Y6V7 483 aaKnown RBP22.11■■□□□ 1.13
SYNE4-202ENST00000340477 COL6A1P12109 1028 aa22.1■■□□□ 1.13
SYNE4-202ENST00000340477 PPP1R18Q6NYC8 613 aa22.1■■□□□ 1.13
SYNE4-202ENST00000340477 CPLX2Q6PUV4 134 aaKnown RBP22.1■■□□□ 1.13
SYNE4-202ENST00000340477 TLK2Q86UE8 772 aa22.1■■□□□ 1.13
SYNE4-202ENST00000340477 PCSK9Q8NBP7 692 aaKnown RBP22.1■■□□□ 1.13
SYNE4-202ENST00000340477 V9GY48 417 aaPredicted RBP22.1■■□□□ 1.13
SYNE4-202ENST00000340477 KIAA1217Q5T5P2 1943 aa22.1■■□□□ 1.13
SYNE4-202ENST00000340477 ADAMTS4O75173 837 aa22.09■■□□□ 1.13
SYNE4-202ENST00000340477 CDC27P30260 824 aa22.09■■□□□ 1.13
SYNE4-202ENST00000340477 ADD1P35611 737 aaKnown RBP22.09■■□□□ 1.13
SYNE4-202ENST00000340477 NAPAP54920 295 aa22.09■■□□□ 1.13
SYNE4-202ENST00000340477 EVCP57679 992 aa22.09■■□□□ 1.13
SYNE4-202ENST00000340477 TOB2Q14106 344 aaPredicted RBP22.09■■□□□ 1.13
SYNE4-202ENST00000340477 TTLL4Q14679 1199 aa22.09■■□□□ 1.13
SYNE4-202ENST00000340477 C8orf34Q49A92 452 aa22.09■■□□□ 1.13
SYNE4-202ENST00000340477 TAPT1Q6NXT6 567 aa22.09■■□□□ 1.13
SYNE4-202ENST00000340477 GPKOWQ92917 476 aaPredicted RBP eCLIP22.09■■□□□ 1.13
SYNE4-202ENST00000340477 ZNF274Q96GC6 653 aaPredicted RBP22.09■■□□□ 1.13
SYNE4-202ENST00000340477 TSEN34Q9BSV6 310 aaKnown RBP22.09■■□□□ 1.13
SYNE4-202ENST00000340477 WDR11Q9BZH6 1224 aa22.09■■□□□ 1.13
SYNE4-202ENST00000340477 UPF3AQ9H1J1 476 aaKnown RBP22.09■■□□□ 1.13
SYNE4-202ENST00000340477 PSTPIP2Q9H939 334 aa22.09■■□□□ 1.13
SYNE4-202ENST00000340477 PDGFCQ9NRA1 345 aa22.09■■□□□ 1.13
SYNE4-202ENST00000340477 MKI67P46013 3256 aaKnown RBP22.08■■□□□ 1.13
SYNE4-202ENST00000340477 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.08■■□□□ 1.13
SYNE4-202ENST00000340477 CPLX1O14810 134 aa22.08■■□□□ 1.13
SYNE4-202ENST00000340477 NKRFO15226 690 aaKnown RBP eCLIP22.08■■□□□ 1.136e-6■■□□□ 11.7
SYNE4-202ENST00000340477 ZEB2O60315 1214 aa22.08■■□□□ 1.13
SYNE4-202ENST00000340477 NR3C2P08235 984 aa22.08■■□□□ 1.13
SYNE4-202ENST00000340477 PDIA3P30101 505 aaKnown RBP22.08■■□□□ 1.13
SYNE4-202ENST00000340477 CCND2P30279 289 aa22.08■■□□□ 1.13
SYNE4-202ENST00000340477 GJA9P57773 515 aa22.08■■□□□ 1.13
SYNE4-202ENST00000340477 DUSP28Q4G0W2 176 aa22.08■■□□□ 1.13
SYNE4-202ENST00000340477 PRPF38BQ5VTL8 546 aaKnown RBP22.08■■□□□ 1.13
SYNE4-202ENST00000340477 UPF2Q9HAU5 1272 aaKnown RBP22.08■■□□□ 1.13
SYNE4-202ENST00000340477 FAM217BQ9NTX9 383 aaPredicted RBP22.08■■□□□ 1.13
SYNE4-202ENST00000340477 PHF24Q9UPV7 400 aa22.08■■□□□ 1.13
SYNE4-202ENST00000340477 Q9Y3F1 56 aa22.08■■□□□ 1.13
SYNE4-202ENST00000340477 ALPK3Q96L96 1907 aa22.08■■□□□ 1.12
SYNE4-202ENST00000340477 MOXD2PA6NHM9 499 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 PIK3CDO00329 1044 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 EIF3JO75822 258 aaKnown RBP22.07■■□□□ 1.12
SYNE4-202ENST00000340477 SEC24BO95487 1268 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 MYCLP12524 364 aaPredicted RBP22.07■■□□□ 1.12
SYNE4-202ENST00000340477 SMPD1P17405 629 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 CST5P28325 142 aaPredicted RBP22.07■■□□□ 1.12
SYNE4-202ENST00000340477 CCT2P78371 535 aaKnown RBP22.07■■□□□ 1.12
SYNE4-202ENST00000340477 FUT2Q10981 343 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 BRDTQ58F21 947 aaPredicted RBP22.07■■□□□ 1.12
SYNE4-202ENST00000340477 GNASQ5JWF2 1037 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 WWC2Q6AWC2 1192 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 TEX2Q8IWB9 1127 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 TRIM22Q8IYM9 498 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 CCDC12Q8WUD4 166 aaPredicted RBP22.07■■□□□ 1.12
SYNE4-202ENST00000340477 PDCD2LQ9BRP1 358 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 GLT8D2Q9H1C3 349 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 EHMT1Q9H9B1 1298 aa22.07■■□□□ 1.12
SYNE4-202ENST00000340477 RBM47A0AV96 593 aaKnown RBP22.06■■□□□ 1.12
SYNE4-202ENST00000340477 SPDYE3A6NKU9 549 aa22.06■■□□□ 1.12
SYNE4-202ENST00000340477 ADCY6O43306 1168 aa22.06■■□□□ 1.12
SYNE4-202ENST00000340477 PGM5Q15124 567 aa22.06■■□□□ 1.12
SYNE4-202ENST00000340477 SEPT14Q6ZU15 432 aa22.06■■□□□ 1.12
SYNE4-202ENST00000340477 GNEQ9Y223 722 aaKnown RBP22.06■■□□□ 1.12
SYNE4-202ENST00000340477 DYNC1LI2O43237 492 aaPredicted RBP22.05■■□□□ 1.12
SYNE4-202ENST00000340477 TXNP10599 105 aaKnown RBP22.05■■□□□ 1.12
SYNE4-202ENST00000340477 SCG2P13521 617 aa22.05■■□□□ 1.12
SYNE4-202ENST00000340477 ADCY7P51828 1080 aa22.05■■□□□ 1.12
SYNE4-202ENST00000340477 ATN1P54259 1190 aaPredicted RBP22.05■■□□□ 1.12
SYNE4-202ENST00000340477 KCNA10Q16322 511 aa22.05■■□□□ 1.12
SYNE4-202ENST00000340477 FSCN1Q16658 493 aaKnown RBP22.05■■□□□ 1.12
SYNE4-202ENST00000340477 PFKFB3Q16875 520 aaPredicted RBP22.05■■□□□ 1.12
SYNE4-202ENST00000340477 USP17L6PQ6QN14 398 aa22.05■■□□□ 1.12
SYNE4-202ENST00000340477 C7orf61Q8IZ16 206 aa22.05■■□□□ 1.12
SYNE4-202ENST00000340477 KLHDC9Q8NEP7 349 aa22.05■■□□□ 1.12
SYNE4-202ENST00000340477 OR6J1Q8NGC5 347 aa22.05■■□□□ 1.12
SYNE4-202ENST00000340477 FERMT2Q96AC1 680 aa22.05■■□□□ 1.12
SYNE4-202ENST00000340477 IL17RAQ96F46 866 aa22.05■■□□□ 1.12
SYNE4-202ENST00000340477 GLT1D1Q96MS3 346 aa22.05■■□□□ 1.12
SYNE4-202ENST00000340477 RNF26Q9BY78 433 aaPredicted RBP22.05■■□□□ 1.12
SYNE4-202ENST00000340477 ALDH8A1Q9H2A2 487 aaPredicted RBP22.05■■□□□ 1.12
SYNE4-202ENST00000340477 BARHL2Q9NY43 387 aa22.05■■□□□ 1.12
SYNE4-202ENST00000340477 A0A1W2PQ45 241 aaPredicted RBP22.04■■□□□ 1.12
SYNE4-202ENST00000340477 A0A1W2PQY0 241 aa22.04■■□□□ 1.12
SYNE4-202ENST00000340477 PRPF3O43395 683 aaKnown RBP22.04■■□□□ 1.12
SYNE4-202ENST00000340477 STAM2O75886 525 aa22.04■■□□□ 1.12
SYNE4-202ENST00000340477 CDKL5O76039 1030 aa22.04■■□□□ 1.12
SYNE4-202ENST00000340477 IFNAR1P17181 557 aa22.04■■□□□ 1.12
SYNE4-202ENST00000340477 CPT1AP50416 773 aa22.04■■□□□ 1.12
SYNE4-202ENST00000340477 ACLYP53396 1101 aa22.04■■□□□ 1.12
SYNE4-202ENST00000340477 STK3Q13188 491 aa22.04■■□□□ 1.12
SYNE4-202ENST00000340477 KCNV1Q6PIU1 500 aa22.04■■□□□ 1.12
SYNE4-202ENST00000340477 SLC26A6Q9BXS9 759 aa22.04■■□□□ 1.12
SYNE4-202ENST00000340477 SLKQ9H2G2 1235 aaPredicted RBP22.04■■□□□ 1.12
SYNE4-202ENST00000340477 NCOA5Q9HCD5 579 aaKnown RBP22.04■■□□□ 1.12
SYNE4-202ENST00000340477 STARD7Q9NQZ5 370 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms