RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 CORO7P57737 925 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 EHHADHQ08426 723 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 IPO4Q8TEX9 1081 aaKnown RBP17.9■□□□□ 0.46
SCARB1-202ENST00000339570 MTMR8Q96EF0 704 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 NDST4Q9H3R1 872 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 ANKIB1Q9P2G1 1089 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 FAM184BQ9ULE4 1060 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 LOC102724428A0A0B4J2F2 783 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 SHTN1A0MZ66 631 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 MCM3P25205 808 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 SIK1P57059 783 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 KRT12Q99456 494 aa17.9■□□□□ 0.46
SCARB1-202ENST00000339570 RHOBTB3O94955 611 aa17.89■□□□□ 0.45
SCARB1-202ENST00000339570 OR52Z1P0C646 297 aa17.89■□□□□ 0.45
SCARB1-202ENST00000339570 CCDC40Q4G0X9 1142 aa17.89■□□□□ 0.45
SCARB1-202ENST00000339570 SOGA3Q5TF21 947 aa17.89■□□□□ 0.45
SCARB1-202ENST00000339570 PPM1EQ8WY54 764 aa17.89■□□□□ 0.45
SCARB1-202ENST00000339570 ERLIN2O94905 339 aa17.89■□□□□ 0.45
SCARB1-202ENST00000339570 TRAPPC10P48553 1259 aa17.89■□□□□ 0.45
SCARB1-202ENST00000339570 MNAT1P51948 309 aa17.89■□□□□ 0.45
SCARB1-202ENST00000339570 ALS2CR12Q96Q35 445 aa17.89■□□□□ 0.45
SCARB1-202ENST00000339570 ZC3H4Q9UPT8 1303 aaKnown RBP17.88■□□□□ 0.45
SCARB1-202ENST00000339570 A0A1W2PQC6 194 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 TNNI2P48788 182 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 SEC24CP53992 1094 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 RAPGEF1Q13905 1077 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 ARL6IP4Q66PJ3 421 aaKnown RBP17.88■□□□□ 0.45
SCARB1-202ENST00000339570 TRIM58Q8NG06 486 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 PIGSQ96S52 555 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 NUDT12Q9BQG2 462 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 TRAF5O00463 557 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 IQCEQ6IPM2 695 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 OR2W6PQ8NHA6 318 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 CALML4Q96GE6 196 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 KBTBD4Q9NVX7 518 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 SRP68Q9UHB9 627 aaKnown RBP17.88■□□□□ 0.45
SCARB1-202ENST00000339570 MAD2L2Q9UI95 211 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.88■□□□□ 0.451e-7■■■■□ 24.4
SCARB1-202ENST00000339570 LRP6O75581 1613 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 SLIT2O94813 1529 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 NID2Q14112 1375 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 GLI1P08151 1106 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 RCAN1P53805 252 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 POLR2FP61218 127 aaKnown RBP17.88■□□□□ 0.45
SCARB1-202ENST00000339570 TUBB4BP68371 445 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 TTMPQ5BVD1 217 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 TADA2BQ86TJ2 420 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 ZIM3Q96PE6 472 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 TMEM47Q9BQJ4 181 aa17.88■□□□□ 0.45
SCARB1-202ENST00000339570 PYM1Q9BRP8 204 aaKnown RBP17.88■□□□□ 0.45
SCARB1-202ENST00000339570 BICDL2A1A5D9 508 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 MYMKA6NI61 221 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 HEXIM1O94992 359 aaKnown RBP17.87■□□□□ 0.45
SCARB1-202ENST00000339570 TDP2O95551 362 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 SLC20A2Q08357 652 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 PACSIN1Q9BY11 444 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 SH2D4AQ9H788 454 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 TUBBP07437 444 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 TTYH3Q9C0H2 523 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 GPCPD1Q9NPB8 672 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 CAPN7Q9Y6W3 813 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 NNTQ13423 1086 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 VWA3BQ502W6 1294 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 ICE2Q659A1 982 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 SV2BQ7L1I2 683 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 PPANQ9NQ55 473 aaKnown RBP17.87■□□□□ 0.45
SCARB1-202ENST00000339570 STIM2Q9P246 746 aa17.87■□□□□ 0.45
SCARB1-202ENST00000339570 COL4A1P02462 1669 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 STXBP3O00186 592 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 PALMO75781 387 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 AARSP49588 968 aaKnown RBP eCLIP17.86■□□□□ 0.454e-6■■■■■ 30.6
SCARB1-202ENST00000339570 NONOQ15233 471 aaKnown RBP eCLIP17.86■□□□□ 0.452e-6■■■□□ 17.2
SCARB1-202ENST00000339570 MEA1Q16626 185 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 CFAP58Q5T655 872 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 HAUS3Q68CZ6 603 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 DDX42Q86XP3 938 aaKnown RBP eCLIP17.86■□□□□ 0.458e-9■□□□□ 10.6
SCARB1-202ENST00000339570 KAT2BQ92831 832 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 DHTKD1Q96HY7 919 aaPredicted RBP17.86■□□□□ 0.45
SCARB1-202ENST00000339570 ADAMTS1Q9UHI8 967 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 HYOU1Q9Y4L1 999 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 DDX60Q8IY21 1712 aaKnown RBP17.86■□□□□ 0.45
SCARB1-202ENST00000339570 NPHP3-ACAD11A0A0J9YXS1 232 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 UBE2SQ16763 222 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 FAM114A1Q8IWE2 563 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 SNX29Q8TEQ0 813 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 NUP58Q9BVL2 599 aa17.86■□□□□ 0.45
SCARB1-202ENST00000339570 MYO1FO00160 1098 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 SLURP2P0DP57 97 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 KCNK18Q7Z418 384 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 ADAT2Q7Z6V5 191 aaKnown RBP17.85■□□□□ 0.45
SCARB1-202ENST00000339570 LRRC47Q8N1G4 583 aaKnown RBP17.85■□□□□ 0.45
SCARB1-202ENST00000339570 TBC1D5Q92609 795 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 TRIM31Q9BZY9 425 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 VIPAS39Q9H9C1 493 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 SEC63Q9UGP8 760 aaKnown RBP17.85■□□□□ 0.45
SCARB1-202ENST00000339570 INPP5BP32019 993 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 EPS15P42566 896 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 PICALMQ13492 652 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 CCDC170Q8IYT3 715 aa17.85■□□□□ 0.45
SCARB1-202ENST00000339570 AENQ8WTP8 325 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms