RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 KIF13BQ9NQT8 1826 aa11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 FZD9O00144 591 aa11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 PES1O00541 588 aaKnown RBP11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 CCT6AP40227 531 aaKnown RBP11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 ZNF280AP59817 542 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 SPP2Q13103 211 aa11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 GRB10Q13322 594 aa11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 MTMR2Q13614 643 aa11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 ECM1Q16610 540 aa11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 IGSF22Q8N9C0 903 aa11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 POLD4Q9HCU8 107 aa11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 TRMT1Q9NXH9 659 aaKnown RBP11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 PKD2L1Q9P0L9 805 aa11.35□□□□□ -0.59
ARHGEF3-202ENST00000338458 PHF20L1A8MW92 1017 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 DDNO94850 711 aaPredicted RBP11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 FCER1AP12319 257 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 SKILP12757 684 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 PDE4DQ08499 809 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 FAM177A1Q8N128 213 aaPredicted RBP11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 ENOX1Q8TC92 643 aaKnown RBP11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 NELFBQ8WX92 580 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 PYM1Q9BRP8 204 aaKnown RBP11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 GGA3Q9NZ52 723 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 KIAA1524Q8TCG1 905 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 CHURC1Q8WUH1 139 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 CPLX3Q8WVH0 158 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 AK8Q96MA6 479 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 PNMA5Q96PV4 448 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 WRNIP1Q96S55 665 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 FAM86B1E9PN63 330 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 TPM3P06753 285 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 FAM86B2P0C5J1 330 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 ERCC3P19447 782 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 RPS12P25398 132 aaKnown RBP11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 CDC25BP30305 580 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 NCAPH2Q6IBW4 605 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 RAB34Q9BZG1 259 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 SLC39A2Q9NP94 309 aa11.34□□□□□ -0.59
ARHGEF3-202ENST00000338458 E9PMD0 336 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 MEIS1O00470 390 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 CHMP2AO43633 222 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 TBC1D12O60347 775 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 FLOT1O75955 427 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 CYP4A11Q02928 519 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 LDHDQ86WU2 507 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 ZHX3Q9H4I2 956 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 INTS13Q9NVM9 706 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 KBTBD4Q9NVX7 518 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 TBC1D7Q9P0N9 293 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 KIAA1024Q9UPX6 916 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 TEX33O43247 280 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 ALAS1P13196 640 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 PAK1Q13153 545 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 ZNF658Q5TYW1 1059 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 PPP4R3AQ6IN85 833 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 BTNL9Q6UXG8 535 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 SV2BQ7L1I2 683 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 TRMT1LQ7Z2T5 733 aaKnown RBP11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 C16orf45Q96MC5 204 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 TRIM9Q9C026 710 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 SH2D4AQ9H788 454 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 SPON1Q9HCB6 807 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 RAVER2Q9HCJ3 691 aaKnown RBP11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 CCPG1Q9ULG6 757 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 POTEB3A0JP26 581 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 POTECB2RU33 542 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 ERCC5P28715 1186 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 PMS1P54277 932 aaKnown RBP11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 SPATA1Q5VX52 437 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 ARMCX5Q6P1M9 558 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 POTEBQ6S5H4 581 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 LARP4BQ92615 738 aaKnown RBP11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 VPS16Q9H269 839 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 BLOC1S4Q9NUP1 217 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 EXOC1Q9NV70 894 aa11.33□□□□□ -0.6
ARHGEF3-202ENST00000338458 KLRC4O43908 158 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 SFPQP23246 707 aaKnown RBP eCLIP11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 STK4Q13043 487 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 HOOK2Q96ED9 719 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 RMND1Q9NWS8 449 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 COL2A1P02458 1487 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 MYMKA6NI61 221 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 CBFA2T2O43439 604 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 HIRAP54198 1017 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 LRRC41Q15345 812 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 TAB2Q9NYJ8 693 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 CTDP1Q9Y5B0 961 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 NPHP3-ACAD11A0A0J9YXS1 232 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 POTEFA5A3E0 1075 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 USP27XA6NNY8 438 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 GCOM1H8Y6P7 765 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 OFD1O75665 1012 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 POLR2MP0CAP2 368 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 POTEIP0CG38 1075 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 ADKP55263 362 aaKnown RBP11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 POTEGQ6S5H5 508 aa11.32□□□□□ -0.6
ARHGEF3-202ENST00000338458 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms