RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 NBPF20Q3BBV1 942 aa28.57■■■□□ 2.16
CDKN3-202ENST00000335183 DGKHQ86XP1 1220 aa28.57■■■□□ 2.16
CDKN3-202ENST00000335183 KIAA1217Q5T5P2 1943 aa28.57■■■□□ 2.16
CDKN3-202ENST00000335183 VCANP13611 3396 aa28.56■■■□□ 2.16
CDKN3-202ENST00000335183 KDM4AO75164 1064 aa28.56■■■□□ 2.16
CDKN3-202ENST00000335183 TRIP12Q14669 1992 aaPredicted RBP28.56■■■□□ 2.16
CDKN3-202ENST00000335183 CWC27Q6UX04 472 aaKnown RBP28.56■■■□□ 2.16
CDKN3-202ENST00000335183 IQCA1Q86XH1 822 aa28.56■■■□□ 2.16
CDKN3-202ENST00000335183 PNMA1Q8ND90 353 aa28.56■■■□□ 2.16
CDKN3-202ENST00000335183 VWCEQ96DN2 955 aa28.56■■■□□ 2.16
CDKN3-202ENST00000335183 RWDD1Q9H446 243 aaPredicted RBP28.56■■■□□ 2.16
CDKN3-202ENST00000335183 TTLL4Q14679 1199 aa28.55■■■□□ 2.16
CDKN3-202ENST00000335183 CDC37Q16543 378 aaPredicted RBP28.55■■■□□ 2.16
CDKN3-202ENST00000335183 PLEKHM2Q8IWE5 1019 aa28.55■■■□□ 2.16
CDKN3-202ENST00000335183 SMC5Q8IY18 1101 aa28.55■■■□□ 2.16
CDKN3-202ENST00000335183 KAT14Q9H8E8 782 aa28.55■■■□□ 2.16
CDKN3-202ENST00000335183 DIAPH3Q9NSV4 1193 aa28.55■■■□□ 2.16
CDKN3-202ENST00000335183 PFKMP08237 780 aa28.54■■■□□ 2.16
CDKN3-202ENST00000335183 MYOGP15173 224 aa28.54■■■□□ 2.16
CDKN3-202ENST00000335183 ATP2A2P16615 1042 aaKnown RBP28.54■■■□□ 2.16
CDKN3-202ENST00000335183 CHMP4BP1P59074 171 aa28.54■■■□□ 2.16
CDKN3-202ENST00000335183 PPP2R2DQ66LE6 453 aa28.54■■■□□ 2.16
CDKN3-202ENST00000335183 CHD1LQ86WJ1 897 aa28.54■■■□□ 2.16
CDKN3-202ENST00000335183 A6NJR5 290 aa28.53■■■□□ 2.16
CDKN3-202ENST00000335183 KPNA6O60684 536 aa28.53■■■□□ 2.16
CDKN3-202ENST00000335183 ARIH2O95376 493 aa28.53■■■□□ 2.16
CDKN3-202ENST00000335183 CCDC178Q5BJE1 867 aa28.53■■■□□ 2.16
CDKN3-202ENST00000335183 NFRKBQ6P4R8 1299 aa28.53■■■□□ 2.16
CDKN3-202ENST00000335183 TBC1D5Q92609 795 aa28.53■■■□□ 2.16
CDKN3-202ENST00000335183 PCDHA11Q9Y5I1 949 aa28.53■■■□□ 2.16
CDKN3-202ENST00000335183 ABCB11O95342 1321 aa28.52■■■□□ 2.16
CDKN3-202ENST00000335183 B4E1Z4 1266 aa28.52■■■□□ 2.16
CDKN3-202ENST00000335183 ADGRF4Q8IZF3 695 aa28.52■■■□□ 2.16
CDKN3-202ENST00000335183 RGS22Q8NE09 1264 aa28.52■■■□□ 2.16
CDKN3-202ENST00000335183 THEGQ9P2T0 379 aa28.52■■■□□ 2.16
CDKN3-202ENST00000335183 NOD1Q9Y239 953 aa28.52■■■□□ 2.16
CDKN3-202ENST00000335183 DHX16O60231 1041 aaKnown RBP28.51■■■□□ 2.15
CDKN3-202ENST00000335183 ACTN1P12814 892 aa28.51■■■□□ 2.15
CDKN3-202ENST00000335183 AAMPQ13685 434 aa28.51■■■□□ 2.15
CDKN3-202ENST00000335183 SEPT14Q6ZU15 432 aa28.51■■■□□ 2.15
CDKN3-202ENST00000335183 RETREG2Q8NC44 543 aa28.51■■■□□ 2.15
CDKN3-202ENST00000335183 TAAR1Q96RJ0 339 aa28.51■■■□□ 2.15
CDKN3-202ENST00000335183 ZSCAN10Q96SZ4 725 aaPredicted RBP28.51■■■□□ 2.15
CDKN3-202ENST00000335183 OSBPL3Q9H4L5 887 aa28.51■■■□□ 2.15
CDKN3-202ENST00000335183 MYH7BA7E2Y1 1941 aa28.51■■■□□ 2.15
CDKN3-202ENST00000335183 SPTBN5Q9NRC6 3674 aaKnown RBP28.5■■■□□ 2.15
CDKN3-202ENST00000335183 NT5C2P49902 561 aa28.5■■■□□ 2.15
CDKN3-202ENST00000335183 PTPN11Q06124 597 aaPredicted RBP28.5■■■□□ 2.15
CDKN3-202ENST00000335183 ASPRV1Q53RT3 343 aa28.5■■■□□ 2.15
CDKN3-202ENST00000335183 IGHDP01880 384 aa28.49■■■□□ 2.15
CDKN3-202ENST00000335183 QRICH1Q2TAL8 776 aa28.49■■■□□ 2.15
CDKN3-202ENST00000335183 SYTL5Q8TDW5 730 aaPredicted RBP28.49■■■□□ 2.15
CDKN3-202ENST00000335183 ATXN2LQ8WWM7 1075 aaKnown RBP28.49■■■□□ 2.15
CDKN3-202ENST00000335183 VAT1LQ9HCJ6 419 aa28.49■■■□□ 2.15
CDKN3-202ENST00000335183 TET1Q8NFU7 2136 aa28.49■■■□□ 2.15
CDKN3-202ENST00000335183 CHD9Q3L8U1 2897 aa28.48■■■□□ 2.15
CDKN3-202ENST00000335183 HIP1O00291 1037 aa28.48■■■□□ 2.15
CDKN3-202ENST00000335183 IQCF3P0C7M6 154 aa28.48■■■□□ 2.15
CDKN3-202ENST00000335183 RFC2P35250 354 aa28.48■■■□□ 2.15
CDKN3-202ENST00000335183 NUCB1Q02818 461 aa28.48■■■□□ 2.15
CDKN3-202ENST00000335183 IMMTQ16891 758 aaKnown RBP28.48■■■□□ 2.15
CDKN3-202ENST00000335183 LY6KQ17RY6 165 aa28.48■■■□□ 2.15
CDKN3-202ENST00000335183 CHST3Q7LGC8 479 aa28.48■■■□□ 2.15
CDKN3-202ENST00000335183 MCF2L2Q86YR7 1114 aa28.48■■■□□ 2.15
CDKN3-202ENST00000335183 MICALL1Q8N3F8 863 aa28.48■■■□□ 2.15
CDKN3-202ENST00000335183 ENAHQ8N8S7 591 aaPredicted RBP28.48■■■□□ 2.15
CDKN3-202ENST00000335183 NSUN6Q8TEA1 469 aaKnown RBP28.48■■■□□ 2.15
CDKN3-202ENST00000335183 AFG1LQ8WV93 481 aa28.48■■■□□ 2.15
CDKN3-202ENST00000335183 FTOQ9C0B1 505 aaKnown RBP eCLIP28.48■■■□□ 2.15
CDKN3-202ENST00000335183 COL20A1Q9P218 1284 aa28.48■■■□□ 2.15
CDKN3-202ENST00000335183 PITPNM1O00562 1244 aa28.47■■■□□ 2.15
CDKN3-202ENST00000335183 GH1P01241 217 aa28.47■■■□□ 2.15
CDKN3-202ENST00000335183 MMP3P08254 477 aa28.47■■■□□ 2.15
CDKN3-202ENST00000335183 PARP1P09874 1014 aaKnown RBP28.47■■■□□ 2.15
CDKN3-202ENST00000335183 BFSP2Q13515 415 aa28.47■■■□□ 2.15
CDKN3-202ENST00000335183 TMEM67Q5HYA8 995 aa28.47■■■□□ 2.15
CDKN3-202ENST00000335183 CCDC62Q6P9F0 684 aa28.47■■■□□ 2.15
CDKN3-202ENST00000335183 ANKS1AQ92625 1134 aa28.47■■■□□ 2.15
CDKN3-202ENST00000335183 DSCC1Q9BVC3 393 aa28.47■■■□□ 2.15
CDKN3-202ENST00000335183 MAF1Q9H063 256 aa28.47■■■□□ 2.15
CDKN3-202ENST00000335183 ZSWIM5Q9P217 1185 aa28.47■■■□□ 2.15
CDKN3-202ENST00000335183 TTC28Q96AY4 2481 aa28.46■■■□□ 2.15
CDKN3-202ENST00000335183 CA3P07451 260 aa28.46■■■□□ 2.15
CDKN3-202ENST00000335183 STXBP2Q15833 593 aa28.46■■■□□ 2.15
CDKN3-202ENST00000335183 FBXO11Q86XK2 927 aa28.46■■■□□ 2.15
CDKN3-202ENST00000335183 ASB2Q96Q27 587 aa28.46■■■□□ 2.15
CDKN3-202ENST00000335183 RMDN3Q96TC7 470 aa28.46■■■□□ 2.15
CDKN3-202ENST00000335183 MRPL11Q9Y3B7 192 aaKnown RBP28.46■■■□□ 2.15
CDKN3-202ENST00000335183 TNFRSF10AO00220 468 aa28.45■■■□□ 2.14
CDKN3-202ENST00000335183 PTGISQ16647 500 aa28.45■■■□□ 2.14
CDKN3-202ENST00000335183 ARHGEF16Q5VV41 709 aa28.45■■■□□ 2.14
CDKN3-202ENST00000335183 SLC9A7Q96T83 725 aa28.45■■■□□ 2.14
CDKN3-202ENST00000335183 UBAC1Q9BSL1 405 aa28.45■■■□□ 2.14
CDKN3-202ENST00000335183 KRT23Q9C075 422 aa28.45■■■□□ 2.14
CDKN3-202ENST00000335183 JMJD4Q9H9V9 463 aa28.45■■■□□ 2.14
CDKN3-202ENST00000335183 PTPRSQ13332 1948 aa28.45■■■□□ 2.14
CDKN3-202ENST00000335183 EIF2AK2P19525 551 aaKnown RBP28.44■■■□□ 2.14
CDKN3-202ENST00000335183 MRPS5P82675 430 aaKnown RBP28.44■■■□□ 2.14
CDKN3-202ENST00000335183 ARHGAP1Q07960 439 aa28.44■■■□□ 2.14
CDKN3-202ENST00000335183 YTHDC1Q96MU7 727 aaKnown RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms