RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 GABPB1Q06547 395 aaPredicted RBP22.85■■□□□ 1.25
LINC01006-201ENST00000333319 GPATCH4Q5T3I0 446 aaKnown RBP22.85■■□□□ 1.25
LINC01006-201ENST00000333319 KRT79Q5XKE5 535 aa22.85■■□□□ 1.25
LINC01006-201ENST00000333319 UNC13DQ70J99 1090 aa22.85■■□□□ 1.25
LINC01006-201ENST00000333319 CEP112Q8N8E3 955 aa22.85■■□□□ 1.25
LINC01006-201ENST00000333319 CUL5Q93034 780 aa22.85■■□□□ 1.25
LINC01006-201ENST00000333319 RASSF10A6NK89 507 aa22.85■■□□□ 1.25
LINC01006-201ENST00000333319 CLK2P49760 499 aaKnown RBP22.85■■□□□ 1.25
LINC01006-201ENST00000333319 TUBB2AQ13885 445 aa22.85■■□□□ 1.25
LINC01006-201ENST00000333319 ZFPM1Q8IX07 1006 aa22.85■■□□□ 1.25
LINC01006-201ENST00000333319 TUBB2BQ9BVA1 445 aa22.85■■□□□ 1.25
LINC01006-201ENST00000333319 TTYH3Q9C0H2 523 aa22.85■■□□□ 1.25
LINC01006-201ENST00000333319 MYH4Q9Y623 1939 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 ZBTB5O15062 677 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 NKRFO15226 690 aaKnown RBP eCLIP22.84■■□□□ 1.25
LINC01006-201ENST00000333319 ALDH1B1P30837 517 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 HSPA1LP34931 641 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 MIIPQ5JXC2 388 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 PPP4R3AQ6IN85 833 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 CENPPQ6IPU0 288 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 NLGN1Q8N2Q7 840 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 PCMTD1Q96MG8 357 aaPredicted RBP22.84■■□□□ 1.25
LINC01006-201ENST00000333319 NUP58Q9BVL2 599 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 TRIM10Q9UDY6 481 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 GUCA1BQ9UMX6 200 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 PVALEFA0A1B0GWK0 134 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 MRPL12P52815 198 aaKnown RBP22.84■■□□□ 1.25
LINC01006-201ENST00000333319 RAD54LQ92698 747 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 ST7Q9NRC1 585 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 DDX25Q9UHL0 483 aaKnown RBP22.84■■□□□ 1.25
LINC01006-201ENST00000333319 PRDM4Q9UKN5 801 aa22.84■■□□□ 1.25
LINC01006-201ENST00000333319 CC2D1AQ6P1N0 951 aaPredicted RBP22.83■■□□□ 1.25
LINC01006-201ENST00000333319 KCNK18Q7Z418 384 aa22.83■■□□□ 1.25
LINC01006-201ENST00000333319 RETREG2Q8NC44 543 aa22.83■■□□□ 1.25
LINC01006-201ENST00000333319 GJA10Q969M2 543 aa22.83■■□□□ 1.25
LINC01006-201ENST00000333319 TMX4Q9H1E5 349 aaPredicted RBP22.83■■□□□ 1.25
LINC01006-201ENST00000333319 PSTPIP2Q9H939 334 aa22.83■■□□□ 1.25
LINC01006-201ENST00000333319 KCNQ5Q9NR82 932 aa22.83■■□□□ 1.25
LINC01006-201ENST00000333319 RAD21O60216 631 aa22.83■■□□□ 1.24
LINC01006-201ENST00000333319 TFRCP02786 760 aaKnown RBP22.83■■□□□ 1.24
LINC01006-201ENST00000333319 IDEP14735 1019 aa22.83■■□□□ 1.24
LINC01006-201ENST00000333319 CRKP46108 304 aa22.83■■□□□ 1.24
LINC01006-201ENST00000333319 MEA1Q16626 185 aa22.83■■□□□ 1.24
LINC01006-201ENST00000333319 ZSCAN29Q8IWY8 852 aaPredicted RBP22.83■■□□□ 1.24
LINC01006-201ENST00000333319 DBNDD1Q9H9R9 158 aa22.83■■□□□ 1.24
LINC01006-201ENST00000333319 COL23A1Q86Y22 540 aaPredicted RBP22.82■■□□□ 1.24
LINC01006-201ENST00000333319 HAS1Q92839 578 aa22.82■■□□□ 1.24
LINC01006-201ENST00000333319 C10orf71Q711Q0 1435 aa22.82■■□□□ 1.24
LINC01006-201ENST00000333319 MARCH6O60337 910 aa22.82■■□□□ 1.24
LINC01006-201ENST00000333319 PLA2G4AP47712 749 aa22.82■■□□□ 1.24
LINC01006-201ENST00000333319 CACNB3P54284 484 aa22.82■■□□□ 1.24
LINC01006-201ENST00000333319 HERVK_113P62684 666 aa22.82■■□□□ 1.24
LINC01006-201ENST00000333319 DDX12PQ92771 950 aa22.82■■□□□ 1.24
LINC01006-201ENST00000333319 MTMR8Q96EF0 704 aa22.82■■□□□ 1.24
LINC01006-201ENST00000333319 HAUS4Q9H6D7 363 aa22.82■■□□□ 1.24
LINC01006-201ENST00000333319 ZNHIT6Q9NWK9 470 aaKnown RBP22.82■■□□□ 1.24
LINC01006-201ENST00000333319 MYH7BA7E2Y1 1941 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 FAM196BA6NMK8 535 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 ZBED6P86452 979 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 TCP10Q12799 353 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 ECM1Q16610 540 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 TMEM119Q4V9L6 283 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 FKBP15Q5T1M5 1219 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 CCDC17Q96LX7 622 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 ERGIC2Q96RQ1 377 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 DNAJC18Q9H819 358 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 TFR2Q9UP52 801 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 PCDHAC2Q9Y5I4 1007 aa22.81■■□□□ 1.24
LINC01006-201ENST00000333319 PDE6BP35913 854 aa22.8■■□□□ 1.24
LINC01006-201ENST00000333319 EHD4Q9H223 541 aa22.8■■□□□ 1.24
LINC01006-201ENST00000333319 GREB1LQ9C091 1923 aaPredicted RBP22.8■■□□□ 1.24
LINC01006-201ENST00000333319 BRWD3Q6RI45 1802 aa22.8■■□□□ 1.24
LINC01006-201ENST00000333319 KIAA0825Q8IV33 1275 aa22.8■■□□□ 1.24
LINC01006-201ENST00000333319 GUF1Q8N442 669 aaKnown RBP22.8■■□□□ 1.24
LINC01006-201ENST00000333319 ARFGAP3Q9NP61 516 aa22.8■■□□□ 1.24
LINC01006-201ENST00000333319 ATP8B1O43520 1251 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 TBC1D8O95759 1140 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 KRT83P78385 493 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 SHROOM1Q2M3G4 852 aaPredicted RBP22.79■■□□□ 1.24
LINC01006-201ENST00000333319 CCDC122Q5T0U0 273 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 MASTLQ96GX5 879 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 ZDHHC15Q96MV8 337 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 LRRC27Q9C0I9 530 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 NHEJ1Q9H9Q4 299 aaPredicted RBP22.79■■□□□ 1.24
LINC01006-201ENST00000333319 PCDHA12Q9UN75 941 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 USP17L15C9J2P7 530 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 USP17L13C9JLJ4 530 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 USP17L11C9JVI0 530 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 USP17L18D6R9N7 530 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 USP17L22D6RA61 530 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 USP17L17D6RBQ6 530 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 USP17L19D6RCP7 530 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 USP17L20D6RJB6 530 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 CYLC1P35663 651 aaPredicted RBP22.79■■□□□ 1.24
LINC01006-201ENST00000333319 USP17L24Q0WX57 530 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 USP17L6PQ6QN14 398 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 ANKZF1Q9H8Y5 726 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 MYO6Q9UM54 1294 aa22.79■■□□□ 1.24
LINC01006-201ENST00000333319 SASH3O75995 380 aa22.78■■□□□ 1.24
LINC01006-201ENST00000333319 EEF2P13639 858 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms