RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SAR1BQ9Y6B6 198 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 BTAF1O14981 1849 aa19.41■□□□□ 0.7
COL9A1-201ENST00000320755 ZNF185O15231 689 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 N4BP1O75113 896 aaKnown RBP19.4■□□□□ 0.7
COL9A1-201ENST00000320755 ZBED6P86452 979 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 RAD51AP2Q09MP3 1159 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 DOK7Q18PE1 504 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 CCDC42Q96M95 316 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 TANGO6Q9C0B7 1094 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 RIOX1Q9H6W3 641 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 MAGEF1Q9HAY2 307 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 JADE2Q9NQC1 790 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 EPHB6O15197 1021 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 CYP2C19P33261 490 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 CAGE1Q8TC20 777 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 MAST2Q6P0Q8 1798 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 KRT79Q5XKE5 535 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 HDXQ7Z353 690 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 CCDC155Q8N6L0 562 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 MSANTD4Q8NCY6 345 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 MTMR9Q96QG7 549 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 TTYH3Q9C0H2 523 aa19.4■□□□□ 0.7
COL9A1-201ENST00000320755 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.4■□□□□ 0.7
COL9A1-201ENST00000320755 NAV1Q8NEY1 1877 aa19.39■□□□□ 0.69
COL9A1-201ENST00000320755 POTEB2H3BUK9 544 aa19.39■□□□□ 0.69
COL9A1-201ENST00000320755 NT5C2P49902 561 aa19.39■□□□□ 0.69
COL9A1-201ENST00000320755 NUP58Q9BVL2 599 aa19.39■□□□□ 0.69
COL9A1-201ENST00000320755 ADGRF4Q8IZF3 695 aa19.39■□□□□ 0.69
COL9A1-201ENST00000320755 DDX12PQ92771 950 aa19.39■□□□□ 0.69
COL9A1-201ENST00000320755 UBXN6Q9BZV1 441 aa19.39■□□□□ 0.69
COL9A1-201ENST00000320755 USP40Q9NVE5 1235 aa19.39■□□□□ 0.69
COL9A1-201ENST00000320755 EDIL3O43854 480 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 CACNB1Q02641 598 aaPredicted RBP19.38■□□□□ 0.69
COL9A1-201ENST00000320755 C15orf52Q6ZUT6 534 aaKnown RBP19.38■□□□□ 0.69
COL9A1-201ENST00000320755 TRAPPC11Q7Z392 1133 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 TBC1D22AQ8WUA7 517 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 CCDC102AQ96A19 550 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 PSMB7Q99436 277 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 NDST4Q9H3R1 872 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 DEF6Q9H4E7 631 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 JMJD4Q9H9V9 463 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 VPS18Q9P253 973 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 RAB21Q9UL25 225 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 FAM196BA6NMK8 535 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 BBOX1O75936 387 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 SPA17Q15506 151 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 MEA1Q16626 185 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 CERS3Q8IU89 383 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 ANKRD13CQ8N6S4 541 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 TRERF1Q96PN7 1200 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 KANSL2Q9H9L4 492 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 L1RE1Q9UN81 338 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 USP17L10C9JJH3 530 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 PSMD14O00487 310 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 KIF5AQ12840 1032 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 ECM1Q16610 540 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 CRY2Q49AN0 593 aa19.38■□□□□ 0.69
COL9A1-201ENST00000320755 SBF2Q86WG5 1849 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 COL24A1Q17RW2 1714 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 MAP2K7O14733 419 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 PPP1R11O60927 126 aaPredicted RBP19.37■□□□□ 0.69
COL9A1-201ENST00000320755 VWA3BQ502W6 1294 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 CENPPQ6IPU0 288 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 RRAGAQ7L523 313 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 CCDC66A2RUB6 948 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 ZNF263O14978 683 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 CACNB3P54284 484 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 UNC13DQ70J99 1090 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 RAB34Q9BZG1 259 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 ZHX3Q9H4I2 956 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 SERPINB13Q9UIV8 391 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 ADAM21Q9UKJ8 722 aa19.37■□□□□ 0.69
COL9A1-201ENST00000320755 G3V3G9 751 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 TNNT3P45378 269 aaPredicted RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 LMAN1P49257 510 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 MRPS25P82663 173 aaKnown RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 ASPRV1Q53RT3 343 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 DCAF8Q5TAQ9 597 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 CERS5Q8N5B7 392 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 FAM163AQ96GL9 167 aaPredicted RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 DDX25Q9UHL0 483 aaKnown RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 GAKO14976 1311 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 DDX60LQ5H9U9 1706 aaKnown RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 USP17L15C9J2P7 530 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 USP17L13C9JLJ4 530 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 USP17L11C9JVI0 530 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 USP17L18D6R9N7 530 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 USP17L22D6RA61 530 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 USP17L17D6RBQ6 530 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 USP17L19D6RCP7 530 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 USP17L20D6RJB6 530 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 AKR1B10O60218 316 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 TTLL1O95922 423 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 DDR1Q08345 913 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 USP17L24Q0WX57 530 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 CASP8Q14790 479 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 USP17L6PQ6QN14 398 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 FNBP4Q8N3X1 1017 aaPredicted RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 RETREG2Q8NC44 543 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 HNRNPLLQ8WVV9 542 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms