RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 PPP2R5BQ15173 497 aa20.44■□□□□ 0.86
EXOSC4-201ENST00000316052 CDC37Q16543 378 aaPredicted RBP20.44■□□□□ 0.86
EXOSC4-201ENST00000316052 IQCA1Q86XH1 822 aa20.44■□□□□ 0.86
EXOSC4-201ENST00000316052 ADGRF4Q8IZF3 695 aa20.44■□□□□ 0.86
EXOSC4-201ENST00000316052 ENAHQ8N8S7 591 aaPredicted RBP20.44■□□□□ 0.86
EXOSC4-201ENST00000316052 ZSCAN10Q96SZ4 725 aaPredicted RBP20.44■□□□□ 0.86
EXOSC4-201ENST00000316052 MSRAQ9UJ68 235 aa20.44■□□□□ 0.86
EXOSC4-201ENST00000316052 YBX2Q9Y2T7 364 aaKnown RBP20.44■□□□□ 0.86
EXOSC4-201ENST00000316052 TNKSO95271 1327 aa20.44■□□□□ 0.86
EXOSC4-201ENST00000316052 NCOR1O75376 2440 aa20.44■□□□□ 0.86
EXOSC4-201ENST00000316052 NKRFO15226 690 aaKnown RBP eCLIP20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 TXNP10599 105 aaKnown RBP20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 CCDC178Q5BJE1 867 aa20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 RPUSD2Q8IZ73 545 aaKnown RBP20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 TAAR1Q96RJ0 339 aa20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 MPHOSPH6Q99547 160 aaKnown RBP20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 DSCC1Q9BVC3 393 aa20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 IL25Q9H293 177 aa20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 NKX2-4Q9H2Z4 354 aa20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 KAT14Q9H8E8 782 aa20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 GPHNQ9NQX3 736 aaPredicted RBP20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 COL20A1Q9P218 1284 aa20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 TRIP12Q14669 1992 aaPredicted RBP20.43■□□□□ 0.86
EXOSC4-201ENST00000316052 TET1Q8NFU7 2136 aa20.42■□□□□ 0.86
EXOSC4-201ENST00000316052 SUPT20HL2P0C7V6 817 aa20.42■□□□□ 0.86
EXOSC4-201ENST00000316052 RABGGTBP53611 331 aa20.42■□□□□ 0.86
EXOSC4-201ENST00000316052 ADGRE1Q14246 886 aa20.42■□□□□ 0.86
EXOSC4-201ENST00000316052 RAB30Q15771 203 aa20.42■□□□□ 0.86
EXOSC4-201ENST00000316052 CCDC62Q6P9F0 684 aa20.42■□□□□ 0.86
EXOSC4-201ENST00000316052 SYTL5Q8TDW5 730 aaPredicted RBP20.42■□□□□ 0.86
EXOSC4-201ENST00000316052 MTIF3Q9H2K0 278 aaKnown RBP20.42■□□□□ 0.86
EXOSC4-201ENST00000316052 PRDM6Q9NQX0 595 aa20.42■□□□□ 0.86
EXOSC4-201ENST00000316052 HIP1O00291 1037 aa20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 MYOGP15173 224 aa20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 NT5C2P49902 561 aa20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 TTLL4Q14679 1199 aa20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 QRICH1Q2TAL8 776 aa20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 BRDTQ58F21 947 aaPredicted RBP20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 FAM47CQ5HY64 1035 aa20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 GAS2L1Q99501 681 aaPredicted RBP20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 JMJD4Q9H9V9 463 aa20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 VAT1LQ9HCJ6 419 aa20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 SLC4A7Q9Y6M7 1214 aa20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 ABCB11O95342 1321 aa20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 BAZ2BQ9UIF8 2168 aaKnown RBP20.41■□□□□ 0.86
EXOSC4-201ENST00000316052 B4DLN1 442 aa20.4■□□□□ 0.86
EXOSC4-201ENST00000316052 KPNA6O60684 536 aa20.4■□□□□ 0.86
EXOSC4-201ENST00000316052 MRPL12P52815 198 aaKnown RBP20.4■□□□□ 0.86
EXOSC4-201ENST00000316052 IMMTQ16891 758 aaKnown RBP20.4■□□□□ 0.86
EXOSC4-201ENST00000316052 LY6KQ17RY6 165 aa20.4■□□□□ 0.86
EXOSC4-201ENST00000316052 ASPRV1Q53RT3 343 aa20.4■□□□□ 0.86
EXOSC4-201ENST00000316052 KIAA1217Q5T5P2 1943 aa20.4■□□□□ 0.86
EXOSC4-201ENST00000316052 NFRKBQ6P4R8 1299 aa20.4■□□□□ 0.86
EXOSC4-201ENST00000316052 DEFB128Q7Z7B8 93 aa20.4■□□□□ 0.86
EXOSC4-201ENST00000316052 PPM1EQ8WY54 764 aa20.4■□□□□ 0.86
EXOSC4-201ENST00000316052 XIRP2A4UGR9 3374 aa20.39■□□□□ 0.86
EXOSC4-201ENST00000316052 RAD50Q92878 1312 aa20.39■□□□□ 0.85
EXOSC4-201ENST00000316052 PARP1P09874 1014 aaKnown RBP20.39■□□□□ 0.85
EXOSC4-201ENST00000316052 SEPT14Q6ZU15 432 aa20.39■□□□□ 0.85
EXOSC4-201ENST00000316052 STAG2Q8N3U4 1231 aa20.39■□□□□ 0.85
EXOSC4-201ENST00000316052 NSUN6Q8TEA1 469 aaKnown RBP20.39■□□□□ 0.85
EXOSC4-201ENST00000316052 AFG1LQ8WV93 481 aa20.39■□□□□ 0.85
EXOSC4-201ENST00000316052 KRT23Q9C075 422 aa20.39■□□□□ 0.85
EXOSC4-201ENST00000316052 MAF1Q9H063 256 aa20.39■□□□□ 0.85
EXOSC4-201ENST00000316052 SLC28A3Q9HAS3 691 aa20.39■□□□□ 0.85
EXOSC4-201ENST00000316052 CTNNA3Q9UI47 895 aa20.39■□□□□ 0.85
EXOSC4-201ENST00000316052 ZBBXA8MT70 800 aa20.38■□□□□ 0.85
EXOSC4-201ENST00000316052 FBXO11Q86XK2 927 aa20.38■□□□□ 0.85
EXOSC4-201ENST00000316052 RMDN3Q96TC7 470 aa20.38■□□□□ 0.85
EXOSC4-201ENST00000316052 MYH7BA7E2Y1 1941 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 OPLAHO14841 1288 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 DHX16O60231 1041 aaKnown RBP20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 PFKMP08237 780 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 ATP2A2P16615 1042 aaKnown RBP20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 PDE4AP27815 886 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 CHMP4BP1P59074 171 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 PTPN11Q06124 597 aaPredicted RBP20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 ARHGAP1Q07960 439 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 SEC23AQ15436 765 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 CYB5R4Q7L1T6 521 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 MCF2L2Q86YR7 1114 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 CTAGE1Q96RT6 745 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 IWS1Q96ST2 819 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 UBAC1Q9BSL1 405 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 MRPL11Q9Y3B7 192 aaKnown RBP20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 PCDHA11Q9Y5I1 949 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 BDP1A6H8Y1 2624 aa20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 PRRC2BQ5JSZ5 2229 aaKnown RBP20.37■□□□□ 0.85
EXOSC4-201ENST00000316052 GH1P01241 217 aa20.36■□□□□ 0.85
EXOSC4-201ENST00000316052 MMP3P08254 477 aa20.36■□□□□ 0.85
EXOSC4-201ENST00000316052 IQCF3P0C7M6 154 aa20.36■□□□□ 0.85
EXOSC4-201ENST00000316052 IGFBP4P22692 258 aa20.36■□□□□ 0.85
EXOSC4-201ENST00000316052 STXBP2Q15833 593 aa20.36■□□□□ 0.85
EXOSC4-201ENST00000316052 CCDC85BQ15834 202 aaPredicted RBP20.36■□□□□ 0.85
EXOSC4-201ENST00000316052 CHST3Q7LGC8 479 aa20.36■□□□□ 0.85
EXOSC4-201ENST00000316052 KAT2BQ92831 832 aa20.36■□□□□ 0.85
EXOSC4-201ENST00000316052 CNNM2Q9H8M5 875 aa20.36■□□□□ 0.85
EXOSC4-201ENST00000316052 PITPNM1O00562 1244 aa20.35■□□□□ 0.85
EXOSC4-201ENST00000316052 PPP1R11O60927 126 aaPredicted RBP20.35■□□□□ 0.85
EXOSC4-201ENST00000316052 GSPT1P15170 499 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms