RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SLC51AQ86UW1 340 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 CCDC170Q8IYT3 715 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 RETREG2Q8NC44 543 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 SPATA4Q8NEY3 305 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 ZIM3Q96PE6 472 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 OSBPL7Q9BZF2 842 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 ZMYND12Q9H0C1 365 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 DISC1Q9NRI5 854 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 GNL3LQ9NVN8 582 aaKnown RBP6.09□□□□□ -1.43
VPS50-202ENST00000305866 PCDHA6Q9UN73 950 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 SUGT1Q9Y2Z0 365 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 PCDHGC5Q9Y5F6 944 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 PCDHA8Q9Y5H6 950 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 LCTP09848 1927 aa6.09□□□□□ -1.43
VPS50-202ENST00000305866 ZSCAN5CA6NGD5 496 aaPredicted RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 H7C1D1 291 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 NMT2O60551 498 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 ZMYND10O75800 440 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 OAS1P00973 400 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 HOXA10P31260 410 aaPredicted RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 KIF4BQ2VIQ3 1234 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 TAF7LQ5H9L4 462 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 PLCD3Q8N3E9 789 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 EIF1ADQ8N9N8 165 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 ANKLE1Q8NAG6 615 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 ATP8B4Q8TF62 1192 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 SCFD2Q8WU76 684 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 MBOAT7Q96N66 472 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 PNMA5Q96PV4 448 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 CNOT8Q9UFF9 292 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 LEMD3Q9Y2U8 911 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 CTAGE15A4D2H0 777 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 DNM1LO00429 736 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 CTAGE8P0CG41 777 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 SCG2P13521 617 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 ADRA2BP18089 450 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 CALML3P27482 149 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 HOXD13P35453 343 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 CLK2P49760 499 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 VAV2P52735 878 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 NAP1L1P55209 391 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 SPAG1Q07617 926 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 STK4Q13043 487 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 PAK1Q13153 545 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 SAFBQ15424 915 aaKnown RBP eCLIP6.08□□□□□ -1.44
VPS50-202ENST00000305866 LACTB2Q53H82 288 aaPredicted RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 UBAP2Q5T6F2 1119 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 PPP1R18Q6NYC8 613 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 KRT26Q7Z3Y9 468 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 SLFN11Q7Z7L1 901 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 CTAGE6Q86UF2 777 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 CTAGE4Q8IX94 777 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 MICALL1Q8N3F8 863 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 CTCFLQ8NI51 663 aaPredicted RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 STAMQ92783 540 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 RPGRIP1Q96KN7 1286 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 TSKSQ9UJT2 592 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 PCDHA4Q9UN74 947 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 CCDC9Q9Y3X0 531 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 SAR1BQ9Y6B6 198 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 FAM169AQ9Y6X4 670 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 CYP2D7A0A087X1C5 515 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 NPM3O75607 178 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 IDH1O75874 414 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 XBP1P17861 261 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 HSPA9P38646 679 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 PPFIA1Q13136 1202 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 QPCTQ16769 361 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 C16orf86Q6ZW13 317 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 KCTD17Q8N5Z5 321 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 GLIS3Q8NEA6 775 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 OR8K1Q8NGG5 319 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 MAGEC3Q8TD91 643 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 AFAP1L1Q8TED9 768 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 JAKMIP2Q96AA8 810 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 FAXDC2Q96IV6 333 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 RNPC3Q96LT9 517 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 MRIQ9BWK5 157 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 FGFBP2Q9BYJ0 223 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 VPS16Q9H269 839 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 RBM12Q9NTZ6 932 aaKnown RBP6.08□□□□□ -1.44
VPS50-202ENST00000305866 RMND1Q9NWS8 449 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 SPATA31A6Q5VVP1 1343 aa6.08□□□□□ -1.44
VPS50-202ENST00000305866 STXBP3O00186 592 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 CES2O00748 559 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 KIF5CO60282 957 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 ALADP13716 330 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 KRT9P35527 623 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 MECOMQ03112 1051 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 GABPAQ06546 454 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 MEI1Q5TIA1 1274 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 FBXW10Q5XX13 1052 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 CRYGNQ8WXF5 182 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 ZKSCAN4Q969J2 545 aaPredicted RBP6.07□□□□□ -1.44
VPS50-202ENST00000305866 OSBPL9Q96SU4 736 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 EDEM3Q9BZQ6 932 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 RIOX1Q9H6W3 641 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 MLXIPQ9HAP2 919 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 BARHL2Q9NY43 387 aa6.07□□□□□ -1.44
VPS50-202ENST00000305866 SYNPO2Q9UMS6 1093 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms