RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 MYO1FO00160 1098 aa16.72■□□□□ 0.27
DDB1-201ENST00000301764 PRPF3O43395 683 aaKnown RBP16.72■□□□□ 0.27
DDB1-201ENST00000301764 MYO1EQ12965 1108 aa16.72■□□□□ 0.27
DDB1-201ENST00000301764 SCARF1Q14162 830 aa16.72■□□□□ 0.27
DDB1-201ENST00000301764 MAPKAPK5Q8IW41 473 aa16.72■□□□□ 0.27
DDB1-201ENST00000301764 TPX2Q9ULW0 747 aaKnown RBP16.72■□□□□ 0.27
DDB1-201ENST00000301764 DNM3Q9UQ16 869 aa16.72■□□□□ 0.27
DDB1-201ENST00000301764 RASSF2P50749 326 aa16.72■□□□□ 0.27
DDB1-201ENST00000301764 EXOC3L4Q17RC7 722 aa16.72■□□□□ 0.27
DDB1-201ENST00000301764 RSRC2Q7L4I2 434 aaKnown RBP16.72■□□□□ 0.27
DDB1-201ENST00000301764 LARP4BQ92615 738 aaKnown RBP16.72■□□□□ 0.27
DDB1-201ENST00000301764 RAB3IPQ96QF0 476 aaPredicted RBP16.72■□□□□ 0.27
DDB1-201ENST00000301764 FMO2Q99518 471 aa16.72■□□□□ 0.27
DDB1-201ENST00000301764 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDB1-201ENST00000301764 DESP17661 470 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 MAGOHP61326 146 aaKnown RBP16.71■□□□□ 0.27
DDB1-201ENST00000301764 GLE1Q53GS7 698 aaKnown RBP16.71■□□□□ 0.27
DDB1-201ENST00000301764 CADPS2Q86UW7 1296 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 SMARCAL1Q9NZC9 954 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 PTPN22Q9Y2R2 807 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 FAM205CA6NFA0 338 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 SNAP23O00161 211 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 EXOC3O60645 756 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 TFRCP02786 760 aaKnown RBP16.71■□□□□ 0.27
DDB1-201ENST00000301764 KRT5P13647 590 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 ANKRD20A3Q5VUR7 823 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 CUEDC2Q9H467 287 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 EHMT1Q9H9B1 1298 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 PCDHA12Q9UN75 941 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 GAS8O95995 478 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 SEC24CP53992 1094 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 GFPT1Q06210 699 aaPredicted RBP16.71■□□□□ 0.27
DDB1-201ENST00000301764 CAPN12Q6ZSI9 719 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 DDX17Q92841 729 aaKnown RBP16.71■□□□□ 0.27
DDB1-201ENST00000301764 ATG3Q9NT62 314 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 PACSIN2Q9UNF0 486 aaPredicted RBP16.71■□□□□ 0.27
DDB1-201ENST00000301764 RFX7Q2KHR2 1363 aa16.71■□□□□ 0.27
DDB1-201ENST00000301764 CIB2O75838 187 aa16.71■□□□□ 0.26
DDB1-201ENST00000301764 DYNLL1P63167 89 aaKnown RBP16.71■□□□□ 0.26
DDB1-201ENST00000301764 MAEAQ7L5Y9 396 aa16.71■□□□□ 0.26
DDB1-201ENST00000301764 HVCN1Q96D96 273 aa16.71■□□□□ 0.26
DDB1-201ENST00000301764 ATP6V1G3Q96LB4 118 aa16.71■□□□□ 0.26
DDB1-201ENST00000301764 CCT8L2Q96SF2 557 aa16.71■□□□□ 0.26
DDB1-201ENST00000301764 SETDB2Q96T68 719 aa16.71■□□□□ 0.26
DDB1-201ENST00000301764 SNX12Q9UMY4 172 aa16.71■□□□□ 0.26
DDB1-201ENST00000301764 SETBP1Q9Y6X0 1596 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 LRRC53A6NM62 1247 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 LUC7L3O95232 432 aaKnown RBP16.7■□□□□ 0.26
DDB1-201ENST00000301764 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
DDB1-201ENST00000301764 TAF11Q15544 211 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 CCDC62Q6P9F0 684 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 USP37Q86T82 979 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 CCDC13Q8IYE1 715 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 GBP5Q96PP8 586 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 CNOT10Q9H9A5 744 aaKnown RBP16.7■□□□□ 0.26
DDB1-201ENST00000301764 ZBTB21Q9ULJ3 1066 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 SUFUQ9UMX1 484 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 PCDHA4Q9UN74 947 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 STK36Q9NRP7 1315 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 PARP9Q8IXQ6 854 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 MYCT1Q8N699 235 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 TGFBRAP1Q8WUH2 860 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 NT5C3AQ9H0P0 336 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 MAGEF1Q9HAY2 307 aa16.7■□□□□ 0.26
DDB1-201ENST00000301764 EIF4E1BA6NMX2 242 aaKnown RBP16.69■□□□□ 0.26
DDB1-201ENST00000301764 THAP12O43422 761 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 ADAMTS2O95450 1211 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 CCDC93Q567U6 631 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 MSANTD4Q8NCY6 345 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 NEK9Q8TD19 979 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 ANKZF1Q9H8Y5 726 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 TMOD2Q9NZR1 351 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 HDAC9Q9UKV0 1011 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 MMEP08473 750 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 LZTS2Q9BRK4 669 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 AGPAT5Q9NUQ2 364 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 NR2F2P24468 414 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 GJA10Q969M2 543 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 VPS37BQ9H9H4 285 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 PP2D1A8MPX8 630 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 SERPING1P05155 500 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 PDE6BP35913 854 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 ANTXR2P58335 489 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 PACS2Q86VP3 889 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 NOP53Q9NZM5 478 aaKnown RBP16.69■□□□□ 0.26
DDB1-201ENST00000301764 COL4A3BPQ9Y5P4 624 aa16.69■□□□□ 0.26
DDB1-201ENST00000301764 CEP152O94986 1710 aa16.68■□□□□ 0.26
DDB1-201ENST00000301764 MYL1P05976 194 aa16.68■□□□□ 0.26
DDB1-201ENST00000301764 CYP2J2P51589 502 aa16.68■□□□□ 0.26
DDB1-201ENST00000301764 CUL1Q13616 776 aa16.68■□□□□ 0.26
DDB1-201ENST00000301764 ZNF473Q8WTR7 871 aaKnown RBP16.68■□□□□ 0.26
DDB1-201ENST00000301764 DDX47Q9H0S4 455 aaKnown RBP16.68■□□□□ 0.26
DDB1-201ENST00000301764 PKD2L1Q9P0L9 805 aa16.68■□□□□ 0.26
DDB1-201ENST00000301764 ARPP21Q9UBL0 812 aaPredicted RBP16.68■□□□□ 0.26
DDB1-201ENST00000301764 LIMA1Q9UHB6 759 aaKnown RBP16.68■□□□□ 0.26
DDB1-201ENST00000301764 CAPN11Q9UMQ6 739 aa16.68■□□□□ 0.26
DDB1-201ENST00000301764 USTQ9Y2C2 406 aa16.68■□□□□ 0.26
DDB1-201ENST00000301764 TXNDC9O14530 226 aa16.68■□□□□ 0.26
DDB1-201ENST00000301764 STAMBPO95630 424 aa16.68■□□□□ 0.26
DDB1-201ENST00000301764 RASGRF1Q13972 1273 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms