RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 NCOA3Q9Y6Q9 1424 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 USP17L12C9JPN9 530 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 USP17L21D6R901 530 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 CHUKO15111 745 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 FMNL1O95466 1100 aaPredicted RBP17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 SLC1A4P43007 532 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 MRPS9P82933 396 aaKnown RBP17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 HSP90AA5PQ58FG0 334 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 P2RX5Q93086 422 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 RNF26Q9BY78 433 aaPredicted RBP17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 N4BP1O75113 896 aaKnown RBP17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 ZWINTO95229 277 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 COG7P83436 770 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 NECTIN1Q15223 517 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 UBE3CQ15386 1083 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 SMYD4Q8IYR2 804 aaPredicted RBP17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 SPZ1Q9BXG8 430 aa17.99■□□□□ 0.47
SNAPC4-201ENST00000298532 PDE1CQ14123 709 aaPredicted RBP17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 MAEAQ7L5Y9 396 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 RSAD2Q8WXG1 361 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 IWS1Q96ST2 819 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 PPP1R9AQ9ULJ8 1098 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 CASC4Q6P4E1 433 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 MAGOHBQ96A72 148 aaKnown RBP17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 GPR108Q9NPR9 543 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 RAB20Q9NX57 234 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 ATP8A1Q9Y2Q0 1164 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 EXOC3L4Q17RC7 722 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 ASAP1Q9ULH1 1129 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 PCDHA12Q9UN75 941 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 CLTCL1P53675 1640 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 MAN2A1Q16706 1144 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 DCAF15Q66K64 600 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 RDH13Q8NBN7 331 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 EEF2KMTQ96G04 330 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 SPHKAPQ2M3C7 1700 aa17.98■□□□□ 0.47
SNAPC4-201ENST00000298532 LAD1O00515 517 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 MFAP3LO75121 409 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 COBLO75128 1261 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 CYP2J2P51589 502 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 DHX9Q08211 1270 aaKnown RBP17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 PPP2R5AQ15172 486 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 CLTCQ00610 1675 aaKnown RBP17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 CAMSAP1Q5T5Y3 1602 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 SERPINB2P05120 415 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 MYL1P05976 194 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 MAN1A1P33908 653 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 PBKQ96KB5 322 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 TLR7Q9NYK1 1049 aaKnown RBP17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 ZC3H13Q5T200 1668 aaKnown RBP17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 LMNB1P20700 586 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 EIF3BP55884 814 aaKnown RBP17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 TAF11Q15544 211 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 ARHGEF18Q6ZSZ5 1173 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 GRAMD1CQ8IYS0 662 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 NHEJ1Q9H9Q4 299 aaPredicted RBP17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 LEMD3Q9Y2U8 911 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 PALLDQ8WX93 1383 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 C1orf167Q5SNV9 1468 aa17.97■□□□□ 0.47
SNAPC4-201ENST00000298532 TEKT1Q969V4 418 aa17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 TXLNGQ9NUQ3 528 aa17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 CXCR5P32302 372 aa17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 SLC8A3P57103 927 aa17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 NAA30Q147X3 362 aaPredicted RBP17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 ANKRD35Q8N283 1001 aa17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 PNMA1Q8ND90 353 aa17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 CCHCR1Q8TD31 782 aa17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 KCNQ3O43525 872 aa17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 CD19P15391 556 aa17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 CLEC4GQ6UXB4 293 aa17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 DDX27Q96GQ7 796 aaKnown RBP17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 FAF1Q9UNN5 650 aaPredicted RBP17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 NOVA2Q9UNW9 492 aaKnown RBP17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 MOCS3O95396 460 aa17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 PCP11498 1178 aaKnown RBP17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 BRDTQ58F21 947 aaPredicted RBP17.96■□□□□ 0.47
SNAPC4-201ENST00000298532 ABCC12Q96J65 1359 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 PLTPP55058 493 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 ZKSCAN8Q15776 578 aaPredicted RBP17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 VPS72Q15906 364 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 FAM133BQ5BKY9 247 aaKnown RBP17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 UIMC1Q96RL1 719 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 ANKRD65E5RJM6 399 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 AK8Q96MA6 479 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 SCOCQ9UIL1 159 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 PFDN1O60925 122 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 RPS6KA4O75676 772 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 MMP1P03956 469 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 SLMAPQ14BN4 828 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 CCDC144BQ3MJ40 725 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 SCYL3Q8IZE3 742 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 BPIFA3Q9BQP9 254 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 THAP9Q9H5L6 903 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 CD2APQ9Y5K6 639 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 SRPRBQ9Y5M8 271 aaKnown RBP17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 LAMC1P11047 1609 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 GIPC1O14908 333 aa17.95■□□□□ 0.46
SNAPC4-201ENST00000298532 SEMA3EO15041 775 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms