RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 TMEM266Q2M3C6 531 aa25.8■■□□□ 1.72
PTX3-201ENST00000295927 CABP7Q86V35 215 aa25.8■■□□□ 1.72
PTX3-201ENST00000295927 SMARCE1Q969G3 411 aa25.8■■□□□ 1.72
PTX3-201ENST00000295927 NAT10Q9H0A0 1025 aaKnown RBP25.8■■□□□ 1.72
PTX3-201ENST00000295927 COL11A1P12107 1806 aaPredicted RBP25.8■■□□□ 1.72
PTX3-201ENST00000295927 RRAGBQ5VZM2 374 aa25.8■■□□□ 1.72
PTX3-201ENST00000295927 RASSF8Q8NHQ8 419 aa25.8■■□□□ 1.72
PTX3-201ENST00000295927 ATG4CQ96DT6 458 aa25.8■■□□□ 1.72
PTX3-201ENST00000295927 CCDC39Q9UFE4 941 aa25.8■■□□□ 1.72
PTX3-201ENST00000295927 VWA5AO00534 786 aa25.79■■□□□ 1.72
PTX3-201ENST00000295927 FDX1P10109 184 aa25.79■■□□□ 1.72
PTX3-201ENST00000295927 SH3D19Q5HYK7 790 aa25.79■■□□□ 1.72
PTX3-201ENST00000295927 SPATA20Q8TB22 786 aa25.79■■□□□ 1.72
PTX3-201ENST00000295927 TTC12Q9H892 705 aaPredicted RBP25.79■■□□□ 1.72
PTX3-201ENST00000295927 LRWD1Q9UFC0 647 aa25.79■■□□□ 1.72
PTX3-201ENST00000295927 MAN1B1Q9UKM7 699 aa25.79■■□□□ 1.72
PTX3-201ENST00000295927 CTDP1Q9Y5B0 961 aaPredicted RBP25.79■■□□□ 1.72
PTX3-201ENST00000295927 MARCH6O60337 910 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 PDIA5Q14554 519 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 RBM46Q8TBY0 533 aaKnown RBP25.78■■□□□ 1.72
PTX3-201ENST00000295927 CNKSR2Q8WXI2 1034 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 CLEC4DQ8WXI8 215 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 WNK4Q96J92 1243 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 PDLIM2Q96JY6 352 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 MMTAG2Q9BU76 263 aaKnown RBP25.78■■□□□ 1.72
PTX3-201ENST00000295927 RAB34Q9BZG1 259 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 KCNMB3Q9NPA1 279 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 CYP3A4P08684 503 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 ALAS1P13196 640 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 NAALADL2Q58DX5 795 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 STAMQ92783 540 aa25.78■■□□□ 1.72
PTX3-201ENST00000295927 RBBP6Q7Z6E9 1792 aaKnown RBP25.77■■□□□ 1.72
PTX3-201ENST00000295927 SMC2O95347 1197 aa25.77■■□□□ 1.72
PTX3-201ENST00000295927 CASP1P29466 404 aa25.77■■□□□ 1.72
PTX3-201ENST00000295927 DSG3P32926 999 aa25.77■■□□□ 1.72
PTX3-201ENST00000295927 CIITAP33076 1130 aa25.77■■□□□ 1.72
PTX3-201ENST00000295927 DPYDQ12882 1025 aa25.77■■□□□ 1.72
PTX3-201ENST00000295927 Q4G0T1 1027 aa25.77■■□□□ 1.72
PTX3-201ENST00000295927 CATSPERGQ6ZRH7 1159 aa25.77■■□□□ 1.72
PTX3-201ENST00000295927 MOB2Q70IA6 237 aa25.77■■□□□ 1.72
PTX3-201ENST00000295927 PNMA8AQ86V59 439 aaPredicted RBP25.77■■□□□ 1.72
PTX3-201ENST00000295927 DHX40Q8IX18 779 aaKnown RBP25.77■■□□□ 1.72
PTX3-201ENST00000295927 GJA10Q969M2 543 aa25.77■■□□□ 1.72
PTX3-201ENST00000295927 PLIN2Q99541 437 aa25.77■■□□□ 1.72
PTX3-201ENST00000295927 MTRQ99707 1265 aa25.77■■□□□ 1.72
PTX3-201ENST00000295927 FAM86B1E9PN63 330 aa25.76■■□□□ 1.72
PTX3-201ENST00000295927 NFIBO00712 420 aa25.76■■□□□ 1.72
PTX3-201ENST00000295927 AP5Z1O43299 807 aa25.76■■□□□ 1.72
PTX3-201ENST00000295927 FAM86B2P0C5J1 330 aa25.76■■□□□ 1.72
PTX3-201ENST00000295927 HSD17B4P51659 736 aa25.76■■□□□ 1.72
PTX3-201ENST00000295927 COG2Q14746 738 aa25.76■■□□□ 1.72
PTX3-201ENST00000295927 PRR16Q569H4 304 aa25.76■■□□□ 1.72
PTX3-201ENST00000295927 BPIFA3Q9BQP9 254 aa25.76■■□□□ 1.72
PTX3-201ENST00000295927 PNMA2Q9UL42 364 aa25.76■■□□□ 1.72
PTX3-201ENST00000295927 PCDHA12Q9UN75 941 aa25.76■■□□□ 1.72
PTX3-201ENST00000295927 POTEMA6NI47 508 aa25.76■■□□□ 1.71
PTX3-201ENST00000295927 BMP6P22004 513 aa25.76■■□□□ 1.71
PTX3-201ENST00000295927 TTLL12Q14166 644 aaPredicted RBP25.76■■□□□ 1.71
PTX3-201ENST00000295927 ANKRD13AQ8IZ07 590 aa25.76■■□□□ 1.71
PTX3-201ENST00000295927 LENG9Q96B70 501 aa25.76■■□□□ 1.71
PTX3-201ENST00000295927 ELP3Q9H9T3 547 aa25.76■■□□□ 1.71
PTX3-201ENST00000295927 GOLGA6L19H0YKK7 550 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 PLCG1P19174 1290 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 PLCB2Q00722 1185 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 MORC3Q14149 939 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 MUM1L1Q5H9M0 696 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 MCF2L2Q86YR7 1114 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 AOPEPQ8N6M6 819 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 TRIML1Q8N9V2 468 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 LRRC15Q8TF66 581 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 CLMNQ96JQ2 1002 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 EHMT1Q9H9B1 1298 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 ADAMTS5Q9UNA0 930 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 BECN2A8MW95 431 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 ZNF76P36508 570 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 REPS2Q8NFH8 660 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 ETNPPLQ8TBG4 499 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 UIMC1Q96RL1 719 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 HOMER2Q9NSB8 354 aa25.75■■□□□ 1.71
PTX3-201ENST00000295927 GTPBP6O43824 516 aaPredicted RBP25.74■■□□□ 1.71
PTX3-201ENST00000295927 ADCY5O95622 1261 aa25.74■■□□□ 1.71
PTX3-201ENST00000295927 GHRHRQ02643 423 aa25.74■■□□□ 1.71
PTX3-201ENST00000295927 SLFN12Q8IYM2 578 aa25.74■■□□□ 1.71
PTX3-201ENST00000295927 CALML4Q96GE6 196 aa25.74■■□□□ 1.71
PTX3-201ENST00000295927 TBX3O15119 743 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 PPATQ06203 517 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 GSDMAQ96QA5 445 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 BLZF1Q9H2G9 400 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 CUEDC2Q9H467 287 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 CLEC11AQ9Y240 323 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 UBXN2AP68543 259 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 CUL4BQ13620 913 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 ERO1BQ86YB8 467 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 CYP2W1Q8TAV3 490 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 TRERF1Q96PN7 1200 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 COL20A1Q9P218 1284 aa25.73■■□□□ 1.71
PTX3-201ENST00000295927 LOC285556D6RIA3 1793 aa25.72■■□□□ 1.71
PTX3-201ENST00000295927 POTEIP0CG38 1075 aa25.72■■□□□ 1.71
PTX3-201ENST00000295927 POTEJP0CG39 1038 aa25.72■■□□□ 1.71
PTX3-201ENST00000295927 GRB10Q13322 594 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms