RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 NOD2Q9HC29 1040 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 LY75O60449 1722 aa14.52□□□□□ -0.08
NUP54-201ENST00000264883 BCORQ6W2J9 1755 aa14.52□□□□□ -0.08
NUP54-201ENST00000264883 RWDD2BP57060 319 aa14.52□□□□□ -0.08
NUP54-201ENST00000264883 CTDSPL2Q05D32 466 aa14.52□□□□□ -0.08
NUP54-201ENST00000264883 NR5A1Q13285 461 aa14.52□□□□□ -0.08
NUP54-201ENST00000264883 LACTB2Q53H82 288 aaPredicted RBP14.52□□□□□ -0.08
NUP54-201ENST00000264883 C8orf74Q6P047 294 aa14.52□□□□□ -0.08
NUP54-201ENST00000264883 TAX1BP1Q86VP1 789 aa14.52□□□□□ -0.08
NUP54-201ENST00000264883 LINC00116Q8NCU8 138 aa14.52□□□□□ -0.08
NUP54-201ENST00000264883 NSMCE1Q8WV22 266 aa14.52□□□□□ -0.08
NUP54-201ENST00000264883 DUSP10Q9Y6W6 482 aa14.52□□□□□ -0.08
NUP54-201ENST00000264883 GSG1L2A8MUP6 293 aa14.52□□□□□ -0.09
NUP54-201ENST00000264883 ATP2C2O75185 946 aa14.52□□□□□ -0.09
NUP54-201ENST00000264883 SLC5A1P13866 664 aa14.52□□□□□ -0.09
NUP54-201ENST00000264883 CCDC181Q5TID7 509 aa14.52□□□□□ -0.09
NUP54-201ENST00000264883 MSL1Q68DK7 614 aa14.52□□□□□ -0.09
NUP54-201ENST00000264883 ZNF34Q8IZ26 560 aa14.52□□□□□ -0.09
NUP54-201ENST00000264883 ARFGAP2Q8N6H7 521 aa14.52□□□□□ -0.09
NUP54-201ENST00000264883 SPATA5Q8NB90 893 aa14.52□□□□□ -0.09
NUP54-201ENST00000264883 PURBQ96QR8 312 aaKnown RBP14.52□□□□□ -0.09
NUP54-201ENST00000264883 UBAC1Q9BSL1 405 aa14.52□□□□□ -0.09
NUP54-201ENST00000264883 PHF20Q9BVI0 1012 aa14.52□□□□□ -0.09
NUP54-201ENST00000264883 DNAJC8O75937 253 aaPredicted RBP14.51□□□□□ -0.09
NUP54-201ENST00000264883 HPDP32754 393 aaPredicted RBP14.51□□□□□ -0.09
NUP54-201ENST00000264883 ELF3P78545 371 aaPredicted RBP14.51□□□□□ -0.09
NUP54-201ENST00000264883 KCNB1Q14721 858 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 RBBP5Q15291 538 aaKnown RBP14.51□□□□□ -0.09
NUP54-201ENST00000264883 IFT20Q8IY31 132 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 C1orf131Q8NDD1 294 aaKnown RBP14.51□□□□□ -0.09
NUP54-201ENST00000264883 PARD3BQ8TEW8 1205 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 SYMPKQ92797 1274 aaKnown RBP14.51□□□□□ -0.09
NUP54-201ENST00000264883 CUL5Q93034 780 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 THOC1Q96FV9 657 aaKnown RBP14.51□□□□□ -0.09
NUP54-201ENST00000264883 GREM2Q9H772 168 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 EBF2Q9HAK2 575 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 HOMER3Q9NSC5 361 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 RGS17Q9UGC6 210 aaPredicted RBP14.51□□□□□ -0.09
NUP54-201ENST00000264883 BAIAP2L1Q9UHR4 511 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 CNTNAP4Q9C0A0 1308 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 PRPF3O43395 683 aaKnown RBP14.51□□□□□ -0.09
NUP54-201ENST00000264883 PDE8AO60658 829 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 CAMTA2O94983 1202 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 SNUPNO95149 360 aaKnown RBP14.51□□□□□ -0.09
NUP54-201ENST00000264883 CALM1P0DP23 149 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 CALM2P0DP24 149 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 CALM3P0DP25 149 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 FGFR2P21802 821 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 PHKA1P46020 1223 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 TRAPPC10P48553 1259 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 KIF5AQ12840 1032 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 MYO1EQ12965 1108 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 PIK3R5Q8WYR1 880 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 STAMBPL1Q96FJ0 436 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 SEC16BQ96JE7 1060 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 SLC39A2Q9NP94 309 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 CPSF2Q9P2I0 782 aaKnown RBP14.51□□□□□ -0.09
NUP54-201ENST00000264883 CAPN11Q9UMQ6 739 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 TRPC6Q9Y210 931 aa14.51□□□□□ -0.09
NUP54-201ENST00000264883 MYH6P13533 1939 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 A0A087X0B3 334 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 UBE2Q2LH0YL09 131 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 MPHOSPH10O00566 681 aaKnown RBP14.5□□□□□ -0.09
NUP54-201ENST00000264883 GTPBP6O43824 516 aaPredicted RBP14.5□□□□□ -0.09
NUP54-201ENST00000264883 AP1G2O75843 785 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 CLSTN1O94985 981 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 FAM153BP0C7A2 387 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 PRLRP16471 622 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 PAK1Q13153 545 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 QPCTQ16769 361 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 FAM153CQ494X1 144 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 RRAGBQ5VZM2 374 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 CAPRIN2Q6IMN6 1127 aaKnown RBP14.5□□□□□ -0.09
NUP54-201ENST00000264883 BZW1Q7L1Q6 419 aaKnown RBP14.5□□□□□ -0.09
NUP54-201ENST00000264883 CACNA2D3Q8IZS8 1091 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 MAGEB6Q8N7X4 407 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 TRIM58Q8NG06 486 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 CCDC47Q96A33 483 aaKnown RBP14.5□□□□□ -0.09
NUP54-201ENST00000264883 ZBTB10Q96DT7 871 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 SPAG5Q96R06 1193 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 FAM153AQ9UHL3 310 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 ANAPC4Q9UJX5 808 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 NFU1Q9UMS0 254 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 LEMD3Q9Y2U8 911 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 SH3BP1Q9Y3L3 701 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 BRWD3Q6RI45 1802 aa14.5□□□□□ -0.09
NUP54-201ENST00000264883 MREGQ8N565 214 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 MB21D1Q8N884 522 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 OXER1Q8TDS5 423 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 ESR2Q92731 530 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 P3H4Q92791 437 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 HVCN1Q96D96 273 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 CCDC85AQ96PX6 553 aaPredicted RBP14.49□□□□□ -0.09
NUP54-201ENST00000264883 OSBPL9Q96SU4 736 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 TSGA10Q9BZW7 698 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 A0A1W2PQC6 194 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 ENO4A6NNW6 628 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 TRAPPC3O43617 180 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 TACC1O75410 805 aa14.49□□□□□ -0.09
NUP54-201ENST00000264883 PCP11498 1178 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms