RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 RBM26Q5T8P6 1007 aaKnown RBP17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 DNAAF5Q86Y56 855 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 KIFC2Q96AC6 838 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 BRIP1Q9BX63 1249 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 PPANQ9NQ55 473 aaKnown RBP17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 ADAMTS1Q9UHI8 967 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 USP17L5A8MUK1 530 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 OPA1O60313 960 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 HLA-DOAP06340 250 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 TMEM139Q8IV31 216 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 MS4A14Q96JA4 679 aa17.91■□□□□ 0.46
PDZRN3-201ENST00000263666 RGPD1P0DJD0 1748 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 RDXP35241 583 aaKnown RBP17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 TRAPPC10P48553 1259 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 GTF2A1P52655 376 aaPredicted RBP17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 CLEC4GQ6UXB4 293 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 GPBP1Q86WP2 473 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 SYCP3Q8IZU3 236 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 TRIM58Q8NG06 486 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 LARP4BQ92615 738 aaKnown RBP17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 SELENOOQ9BVL4 669 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 NDST4Q9H3R1 872 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 ANKZF1Q9H8Y5 726 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 EPB41L5Q9HCM4 733 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 ATP8B1O43520 1251 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 KRT13P13646 458 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 TBX2Q13207 712 aaPredicted RBP17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 FOXR1Q6PIV2 292 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 VPS36Q86VN1 386 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 TBC1D5Q92609 795 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 BSDC1Q9NW68 430 aaPredicted RBP17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 NARFQ9UHQ1 456 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 PCDHA12Q9UN75 941 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 RIC1Q4ADV7 1423 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 ADAMTS3O15072 1205 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 CACNB3P54284 484 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 ZBED6P86452 979 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 EZH2Q15910 746 aaKnown RBP17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 SFMBT2Q5VUG0 894 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 FAM133AQ8N9E0 248 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 GOLPH3Q9H4A6 298 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 LRRC53A6NM62 1247 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 CDR1P51861 262 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 TUBB2AQ13885 445 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 MYOCDQ8IZQ8 938 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 TUBB2BQ9BVA1 445 aa17.9■□□□□ 0.46
PDZRN3-201ENST00000263666 LRRIQ3A6PVS8 624 aaPredicted RBP17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 CAMTA2O94983 1202 aa17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 SARSP49591 514 aaKnown RBP17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 OTUD6BQ8N6M0 293 aa17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 PCDHA13Q9Y5I0 950 aa17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 PABPC4Q13310 644 aaKnown RBP eCLIP17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 CCDC25Q86WR0 208 aa17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 DPH5Q9H2P9 285 aa17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 ZRANB2O95218 330 aaKnown RBP eCLIP17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 FAM26FQ5R3K3 315 aa17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 BEND6Q5SZJ8 279 aaPredicted RBP17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 BARGINQ6ZT62 677 aa17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 RIOK1Q9BRS2 568 aaKnown RBP17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 TSGA10Q9BZW7 698 aa17.89■□□□□ 0.45
PDZRN3-201ENST00000263666 UBXN2AP68543 259 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 PRR16Q569H4 304 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 ADSSL1Q8N142 457 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 FBXL16Q8N461 479 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 LRRC1Q9BTT6 524 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 NFU1Q9UMS0 254 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 BCS1LQ9Y276 419 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 GOLGA6L7A0A1B0GV03 622 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 DDX39AO00148 427 aaKnown RBP17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 PDCLQ13371 301 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 ASIC2Q16515 512 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 CCDC84Q86UT8 332 aaPredicted RBP17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 CCDC65Q8IXS2 484 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 SH2D3CQ8N5H7 860 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 FLAD1Q8NFF5 587 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 CEP95Q96GE4 821 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 VEZTQ9HBM0 779 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 PANK4Q9NVE7 773 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 LIMA1Q9UHB6 759 aaKnown RBP17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 PCDHA6Q9UN73 950 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 HYOU1Q9Y4L1 999 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 PCDHA8Q9Y5H6 950 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 SETD1AO15047 1707 aaKnown RBP17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 NTSR2O95665 410 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 TUBBP07437 444 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 CDK8P49336 464 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 E2F4Q16254 413 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 ARHGAP44Q17R89 818 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 CEP85LQ5SZL2 805 aa17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 CTNNBL1Q8WYA6 563 aaPredicted RBP17.88■□□□□ 0.45
PDZRN3-201ENST00000263666 SFI1A8K8P3 1242 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 ERLIN2O94905 339 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 RSRC2Q7L4I2 434 aaKnown RBP17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 LCMT1Q9UIC8 334 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 CLIC2O15247 247 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 HEXIM1O94992 359 aaKnown RBP17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 CFAP221Q4G0U5 840 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 JDP2Q8WYK2 163 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 CETN3O15182 167 aa17.87■□□□□ 0.45
PDZRN3-201ENST00000263666 MRPL12P52815 198 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms