RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 GCFC2P16383 781 aaKnown RBP9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 EPS15P42566 896 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 GOLGA8FQ08AF8 430 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 GOLGA8DPQ0D2H9 430 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 MORC3Q14149 939 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 CACTINQ8WUQ7 758 aaKnown RBP9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.852e-7■■■□□ 16.1
CALCOCO2-201ENST00000258947 ZNF541Q9H0D2 1346 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 LMNB1P20700 586 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 PRPHP41219 470 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 SP4Q02446 784 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 DPYDQ12882 1025 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 KMT5BQ4FZB7 885 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 LDHDQ86WU2 507 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 TBC1D5Q92609 795 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 HPS3Q969F9 1004 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 DCPSQ96C86 337 aaKnown RBP9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 AGBL1Q96MI9 1066 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 TMOD4Q9NZQ9 345 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 KIAA1551Q9HCM1 1747 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 FAM237AA0A1B0GTK4 181 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 ZBED4O75132 1171 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 BMP6P22004 513 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 MTIF2P46199 727 aaKnown RBP9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 HMGCS2P54868 508 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 TSR1Q2NL82 804 aaKnown RBP9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 HAUS3Q68CZ6 603 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 FAM160B2Q86V87 743 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 SLF1Q9BQI6 1058 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 TAB2Q9NYJ8 693 aa9.75□□□□□ -0.85
CALCOCO2-201ENST00000258947 TNS1Q9HBL0 1735 aaKnown RBP9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 AP3B2Q13367 1082 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 FKBP1CQ5VVH2 108 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 SLC30A10Q6XR72 485 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 TRPM4Q8TD43 1214 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 DPF2Q92785 391 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 AS3MTQ9HBK9 375 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 FEM1BQ9UK73 627 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 ATRNL1Q5VV63 1379 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 LAMB1P07942 1786 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 TRIM49BA6NDI0 452 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 SARM1Q6SZW1 724 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 TPH2Q8IWU9 490 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 CSGALNACT2Q8N6G5 542 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 BPIFA3Q9BQP9 254 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 CCSER1Q9C0I3 900 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 POLD4Q9HCU8 107 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 POTEB3A0JP26 581 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 POTECB2RU33 542 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 GAS7O60861 476 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 ERCC5P28715 1186 aaPredicted RBP9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 MDM2Q00987 491 aaPredicted RBP9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 PABPC4Q13310 644 aaKnown RBP eCLIP9.74□□□□□ -0.858e-7■□□□□ 8.3
CALCOCO2-201ENST00000258947 SPATA1Q5VX52 437 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 DPY19L2Q6NUT2 758 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 POTEBQ6S5H4 581 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 APOBEC3FQ8IUX4 373 aaKnown RBP9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 SLFN12Q8IYM2 578 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 C4orf32Q8N8J7 132 aa9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 PRPF38AQ8NAV1 312 aaKnown RBP9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 ENOX1Q8TC92 643 aaKnown RBP9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 RPAP3Q9H6T3 665 aaPredicted RBP9.74□□□□□ -0.85
CALCOCO2-201ENST00000258947 CNTNAP1P78357 1384 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 E9PMD0 336 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 M0R2N6 131 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 PRCPP42785 496 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 LRRC41Q15345 812 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 SUPT20HL1Q3ZLR7 823 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 HERC4Q5GLZ8 1057 aaPredicted RBP9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 KIAA1755Q5JYT7 1200 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 ZNF658Q5TYW1 1059 aaPredicted RBP9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 PDXDC2PQ6P474 469 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 CNNM4Q6P4Q7 775 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 GPBP1Q86WP2 473 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 ADAMTSL1Q8N6G6 1762 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 CYP2W1Q8TAV3 490 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 SRRTQ9BXP5 876 aaKnown RBP9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 LRRC27Q9C0I9 530 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 CSADQ9Y600 493 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 DDX60LQ5H9U9 1706 aaKnown RBP9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 CD44P16070 742 aaKnown RBP9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 EIF2AK2P19525 551 aaKnown RBP9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 NF2P35240 595 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 NCAPHQ15003 741 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 LRCH2Q5VUJ6 765 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 LRRC8AQ8IWT6 810 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 NELFCDQ8IXH7 590 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 CCDC150Q8NCX0 1101 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 NT5C3AQ9H0P0 336 aa9.73□□□□□ -0.85
CALCOCO2-201ENST00000258947 ABCB11O95342 1321 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 TESPA1A2RU30 521 aaPredicted RBP9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 POTEFA5A3E0 1075 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 PPP1R12BO60237 982 aaPredicted RBP9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 SORBS3O60504 671 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 ECM2O94769 699 aaPredicted RBP9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 POTEIP0CG38 1075 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 ADKP55263 362 aaKnown RBP9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 UBXN1Q04323 297 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 POTEGQ6S5H5 508 aa9.72□□□□□ -0.85
CALCOCO2-201ENST00000258947 POTEEQ6S8J3 1075 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms