RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 SEC63Q9UGP8 760 aaKnown RBP18.69■□□□□ 0.58
SGPP1-201ENST00000247225 PDS5AQ29RF7 1337 aaKnown RBP18.69■□□□□ 0.58
SGPP1-201ENST00000247225 CAMTA1Q9Y6Y1 1673 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 SMIM23A6NLE4 172 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 IRX3P78415 501 aaPredicted RBP18.69■□□□□ 0.58
SGPP1-201ENST00000247225 RCSD1Q6JBY9 416 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 OTUD6BQ8N6M0 293 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 MTMR8Q96EF0 704 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 MYH2Q9UKX2 1941 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 MYH10P35580 1976 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 PICALMQ13492 652 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 TCERG1LQ5VWI1 586 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 NAA35Q5VZE5 725 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 AMOTL1Q8IY63 956 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 C4orf32Q8N8J7 132 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 TBC1D5Q92609 795 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 PYM1Q9BRP8 204 aaKnown RBP18.68■□□□□ 0.58
SGPP1-201ENST00000247225 AP1M1Q9BXS5 423 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 MYO1FO00160 1098 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 GLI1P08151 1106 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 CT47A1Q5JQC4 288 aaPredicted RBP18.68■□□□□ 0.58
SGPP1-201ENST00000247225 FAM114A1Q8IWE2 563 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 ZIM3Q96PE6 472 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 FER1L4A9Z1Z3 1794 aa18.68■□□□□ 0.58
SGPP1-201ENST00000247225 LOC102724428A0A0B4J2F2 783 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 PALMO75781 387 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 SIK1P57059 783 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 PRPF4BQ13523 1007 aaKnown RBP18.67■□□□□ 0.58
SGPP1-201ENST00000247225 CEP85LQ5SZL2 805 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 MARCH10Q8NA82 808 aaPredicted RBP18.67■□□□□ 0.58
SGPP1-201ENST00000247225 SNX29Q8TEQ0 813 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 ITPK1Q13572 414 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 NONOQ15233 471 aaKnown RBP eCLIP18.67■□□□□ 0.58
SGPP1-201ENST00000247225 TRMT1LQ7Z2T5 733 aaKnown RBP18.67■□□□□ 0.58
SGPP1-201ENST00000247225 KIAA0895Q8NCT3 520 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 NUDT12Q9BQG2 462 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 NUP58Q9BVL2 599 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 STIM2Q9P246 746 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 HYOU1Q9Y4L1 999 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 MYMKA6NI61 221 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 TDP2O95551 362 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 TRAPPC10P48553 1259 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 GRIK5Q16478 980 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 VWA3BQ502W6 1294 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 LRRC47Q8N1G4 583 aaKnown RBP18.67■□□□□ 0.58
SGPP1-201ENST00000247225 TMEM47Q9BQJ4 181 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 LSM14BQ9BX40 385 aaKnown RBP18.67■□□□□ 0.58
SGPP1-201ENST00000247225 BRIP1Q9BX63 1249 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 PACSIN1Q9BY11 444 aa18.67■□□□□ 0.58
SGPP1-201ENST00000247225 SRP68Q9UHB9 627 aaKnown RBP18.67■□□□□ 0.58
SGPP1-201ENST00000247225 LOC102724159A0A0B4J2E5 919 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 NPHP3-ACAD11A0A0J9YXS1 232 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 ERVV-1B6SEH8 477 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 OPA1O60313 960 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 RHOBTB3O94955 611 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 PWP2Q15269 919 aaKnown RBP18.66■□□□□ 0.58
SGPP1-201ENST00000247225 LLGL1Q15334 1064 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 KIAA0753Q2KHM9 967 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 FAM182BQ5T319 152 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 ARL6IP4Q66PJ3 421 aaKnown RBP18.66■□□□□ 0.58
SGPP1-201ENST00000247225 FAM133AQ8N9E0 248 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 NOX5Q96PH1 765 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 ATRNO75882 1429 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 A0A1W2PQC6 194 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 KCNK3O14649 394 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 IFT88Q13099 833 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 PPFIA1Q13136 1202 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 UBE2SQ16763 222 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 INTS5Q6P9B9 1019 aaKnown RBP18.66■□□□□ 0.58
SGPP1-201ENST00000247225 DHTKD1Q96HY7 919 aaPredicted RBP18.66■□□□□ 0.58
SGPP1-201ENST00000247225 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.66■□□□□ 0.585e-9■■■■■ 51.3
SGPP1-201ENST00000247225 E7EVH7 732 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 AMPD3Q01432 767 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 SLC35G1Q2M3R5 365 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 TTMPQ5BVD1 217 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 MIIPQ5JXC2 388 aa18.66■□□□□ 0.58
SGPP1-201ENST00000247225 C4AP0C0L4 1744 aa18.65■□□□□ 0.58
SGPP1-201ENST00000247225 C4BP0C0L5 1744 aa18.65■□□□□ 0.58
SGPP1-201ENST00000247225 CEP104O60308 925 aa18.65■□□□□ 0.58
SGPP1-201ENST00000247225 RPS8P62241 208 aaKnown RBP18.65■□□□□ 0.58
SGPP1-201ENST00000247225 UHMK1Q8TAS1 419 aaKnown RBP18.65■□□□□ 0.58
SGPP1-201ENST00000247225 SH2D4AQ9H788 454 aa18.65■□□□□ 0.58
SGPP1-201ENST00000247225 CNNM4Q6P4Q7 775 aa18.65■□□□□ 0.58
SGPP1-201ENST00000247225 NBPF5PQ86XG9 351 aaPredicted RBP18.65■□□□□ 0.58
SGPP1-201ENST00000247225 KAT2BQ92831 832 aa18.65■□□□□ 0.58
SGPP1-201ENST00000247225 SEPT11Q9NVA2 429 aaKnown RBP18.65■□□□□ 0.58
SGPP1-201ENST00000247225 KBTBD4Q9NVX7 518 aa18.65■□□□□ 0.58
SGPP1-201ENST00000247225 CAMTA2O94983 1202 aa18.64■□□□□ 0.58
SGPP1-201ENST00000247225 NTSR2O95665 410 aa18.64■□□□□ 0.58
SGPP1-201ENST00000247225 SLURP2P0DP57 97 aa18.64■□□□□ 0.58
SGPP1-201ENST00000247225 CALCRLQ16602 461 aa18.64■□□□□ 0.58
SGPP1-201ENST00000247225 CCDC170Q8IYT3 715 aa18.64■□□□□ 0.58
SGPP1-201ENST00000247225 ANAPC4Q9UJX5 808 aa18.64■□□□□ 0.58
SGPP1-201ENST00000247225 HAUS3Q68CZ6 603 aa18.64■□□□□ 0.57
SGPP1-201ENST00000247225 TAF4BQ92750 862 aa18.64■□□□□ 0.57
SGPP1-201ENST00000247225 RNPC3Q96LT9 517 aaKnown RBP18.64■□□□□ 0.57
SGPP1-201ENST00000247225 SIPA1L3O60292 1781 aaPredicted RBP18.64■□□□□ 0.57
SGPP1-201ENST00000247225 KIF13AQ9H1H9 1805 aa18.64■□□□□ 0.57
SGPP1-201ENST00000247225 AKAP11Q9UKA4 1901 aa18.64■□□□□ 0.57
SGPP1-201ENST00000247225 KCPQ6ZWJ8 1503 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms